Analysis of interatomic Contacts of Structural Units in PDB entry:
6OR2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6OR2 entry

There is 1 chain in PDB entry 6OR2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
MET 1LYS 761
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 39 helices in PDB entry 6OR2. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
1 12Right-handed alpha
Helix 2
AA2
A
12 32Right-handed alpha
Helix 3
AA3
A
33 37Right-handed 310
Helix 4
AA4
A
48 62Right-handed alpha
Helix 5
AA5
A
83 101Right-handed alpha
Helix 6
AA6
A
112 114Right-handed 310
Helix 7
AA7
A
119 124Right-handed alpha
Helix 8
AA8
A
143 160Right-handed alpha
Helix 9
AA9
A
161 164Right-handed 310
Helix 10
AB1
A
170 192Right-handed alpha
Helix 11
AB2
A
192 206Right-handed alpha
Helix 12
AB3
A
207 233Right-handed alpha
Helix 13
AB4
A
241 249Right-handed alpha
Helix 14
AB5
A
249 272Right-handed alpha
Helix 15
AB6
A
274 302Right-handed alpha
Helix 16
AB7
A
303 307Right-handed 310
Helix 17
AB8
A
309 331Right-handed alpha
Helix 18
AB9
A
332 342Right-handed alpha
Helix 19
AC1
A
343 347Right-handed 310
Helix 20
AC2
A
383 400Right-handed alpha
Helix 21
AC3
A
401 415Right-handed alpha
Helix 22
AC4
A
416 422Right-handed 310
Helix 23
AC5
A
428 432Right-handed 310
Helix 24
AC6
A
436 449Right-handed alpha
Helix 25
AC7
A
470 482Right-handed alpha
Helix 26
AC8
A
493 497Right-handed 310
Helix 27
AC9
A
522 524Right-handed 310
Helix 28
AD1
A
525 535Right-handed alpha
Helix 29
AD2
A
548 583Right-handed alpha
Helix 30
AD3
A
586 612Right-handed alpha
Helix 31
AD4
A
616 621Right-handed alpha
Helix 32
AD5
A
629 659Right-handed alpha
Helix 33
AD6
A
663 675Right-handed alpha
Helix 34
AD7
A
675 694Right-handed alpha
Helix 35
AD8
A
698 717Right-handed alpha
Helix 36
AD9
A
717 722Right-handed alpha
Helix 37
AE1
A
722 732Right-handed alpha
Helix 38
AE2
A
733 737Right-handed 310
Helix 39
AE3
A
739 750Right-handed alpha
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There are 3 sheets in PDB entry 6OR2. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
109 110first strand
Strand 2
A
133 136anti-parallel
Strand 3
A
70 73anti-parallel
Strand 4
A
166 169anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
424 425first strand
Strand 2
A
627 628parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
499 500first strand
Strand 2
A
513 519anti-parallel
Strand 3
A
456 463anti-parallel
Strand 4
A
542 547anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il