Analysis of interatomic Contacts of Structural Units in PDB entry:
6ORG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6ORG entry

There are 2 chains in PDB entry 6ORG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 2PRO 451
B
 LYS 3GLY 452
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 36 helices in PDB entry 6ORG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
12 22Right-handed alpha
Helix 2
AA2
A
30 35Right-handed alpha
Helix 3
AA3
A
45 49Right-handed 310
Helix 4
AA4
A
55 66Right-handed alpha
Helix 5
AA5
A
92 96Right-handed 310
Helix 6
AA6
A
97 102Right-handed 310
Helix 7
AA7
A
104 117Right-handed alpha
Helix 8
AA8
A
135 137Right-handed 310
Helix 9
AA9
A
138 156Right-handed alpha
Helix 10
AB1
A
176 180Right-handed 310
Helix 11
AB2
A
184 197Right-handed alpha
Helix 12
AB3
A
228 232Right-handed 310
Helix 13
AB4
A
237 244Right-handed alpha
Helix 14
AB5
A
274 285Right-handed alpha
Helix 15
AB6
A
286 289Right-handed 310
Helix 16
AB7
A
305 323Right-handed alpha
Helix 17
AB8
A
339 349Right-handed 310
Helix 18
AB9
A
384 388Right-handed 310
Helix 19
AC1
B
12 22Right-handed alpha
Helix 20
AC2
B
30 35Right-handed alpha
Helix 21
AC3
B
45 49Right-handed 310
Helix 22
AC4
B
55 66Right-handed alpha
Helix 23
AC5
B
92 96Right-handed 310
Helix 24
AC6
B
97 102Right-handed 310
Helix 25
AC7
B
104 117Right-handed alpha
Helix 26
AC8
B
135 137Right-handed 310
Helix 27
AC9
B
138 155Right-handed alpha
Helix 28
AD1
B
176 180Right-handed 310
Helix 29
AD2
B
184 197Right-handed alpha
Helix 30
AD3
B
228 232Right-handed 310
Helix 31
AD4
B
237 244Right-handed alpha
Helix 32
AD5
B
274 285Right-handed alpha
Helix 33
AD6
B
286 289Right-handed 310
Helix 34
AD7
B
305 323Right-handed alpha
Helix 35
AD8
B
339 349Right-handed 310
Helix 36
AD9
B
384 388Right-handed 310
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There are 10 sheets in PDB entry 6ORG. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
23 27first strand
Strand 2
A
70 76parallel
Strand 3
A
119 124parallel
Strand 4
A
167 169parallel
Strand 5
A
200 202parallel
Strand 6
A
209 211parallel
Strand 7
A
253 259parallel
Strand 8
A
292 295parallel
Strand 9
A
23 27parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
226 227first strand
Strand 2
A
250 251anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
332 334first strand
Strand 2
A
364 382anti-parallel
Strand 3
A
417 436anti-parallel
Strand 4
A
391 400anti-parallel
Strand 5
A
403 410anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
332 334first strand
Strand 2
A
364 382anti-parallel
Strand 3
A
444 448anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
356 357first strand
Strand 2
A
441 442anti-parallel
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There are 9 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
23 27first strand
Strand 2
B
70 76parallel
Strand 3
B
119 124parallel
Strand 4
B
167 169parallel
Strand 5
B
200 202parallel
Strand 6
B
209 211parallel
Strand 7
B
253 259parallel
Strand 8
B
292 295parallel
Strand 9
B
23 27parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
226 227first strand
Strand 2
B
250 251anti-parallel
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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
332 334first strand
Strand 2
B
364 382anti-parallel
Strand 3
B
417 436anti-parallel
Strand 4
B
391 400anti-parallel
Strand 5
B
403 410anti-parallel
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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
332 334first strand
Strand 2
B
364 382anti-parallel
Strand 3
B
444 448anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
356 357first strand
Strand 2
B
441 442anti-parallel
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