Analysis of interatomic Contacts of Structural Units in PDB entry:
6ORN

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6ORN entry

There are 12 chains in PDB entry 6ORN (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
C	VAL 518	ASP 664
G	ALA 31	VAL 505
J	VAL 518	ASP 664
K	ALA 31	VAL 505
Q	VAL 518	ASP 664
R	ALA 31	VAL 505
A	GLN 1	ALA 133
F	GLN 1	ALA 114
O	GLN 1	ALA 114
B	VAL 8	GLY 108
I	VAL 8	GLY 108
P	VAL 8	GLY 108

There are 39 helices in PDB entry 6ORN. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	C	529	534	Right-handed alpha
Helix 2	AA2	C	537	543	Right-handed alpha
Helix 3	AA3	C	573	596	Right-handed alpha
Helix 4	AA4	C	627	636	Right-handed alpha
Helix 5	AA5	C	638	662	Right-handed alpha
Helix 6	AA6	G	99	115	Right-handed alpha
Helix 7	AA7	G	177	179	Right-handed 310
Helix 8	AA8	G	335	350	Right-handed alpha
Helix 9	AA9	G	351	353	Right-handed 310
Helix 10	AB1	G	368	373	Right-handed alpha
Helix 11	AB2	G	387	391	Right-handed 310
Helix 12	AB3	G	425	429	Right-handed 310
Helix 13	AB4	G	476	481	Right-handed alpha
Helix 14	AB5	J	529	534	Right-handed alpha
Helix 15	AB6	J	537	543	Right-handed alpha
Helix 16	AB7	J	573	596	Right-handed alpha
Helix 17	AB8	J	627	636	Right-handed alpha
Helix 18	AB9	J	638	662	Right-handed alpha
Helix 19	AC1	K	99	115	Right-handed alpha
Helix 20	AC2	K	177	179	Right-handed 310
Helix 21	AC3	K	335	350	Right-handed alpha
Helix 22	AC4	K	351	353	Right-handed 310
Helix 23	AC5	K	368	373	Right-handed alpha
Helix 24	AC6	K	387	391	Right-handed 310
Helix 25	AC7	K	425	429	Right-handed 310
Helix 26	AC8	K	476	481	Right-handed alpha
Helix 27	AC9	Q	529	534	Right-handed alpha
Helix 28	AD1	Q	537	543	Right-handed alpha
Helix 29	AD2	Q	573	596	Right-handed alpha
Helix 30	AD3	Q	627	636	Right-handed alpha
Helix 31	AD4	Q	638	662	Right-handed alpha
Helix 32	AD5	R	99	115	Right-handed alpha
Helix 33	AD6	R	177	179	Right-handed 310
Helix 34	AD7	R	335	350	Right-handed alpha
Helix 35	AD8	R	351	353	Right-handed 310
Helix 36	AD9	R	368	373	Right-handed alpha
Helix 37	AE1	R	387	391	Right-handed 310
Helix 38	AE2	R	425	429	Right-handed 310
Helix 39	AE3	R	476	481	Right-handed alpha

There are 41 sheets in PDB entry 6ORN. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	35	40	first strand
Strand 2	G	494	499	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	45	46	first strand
Strand 2	G	487	491	anti-parallel
Strand 3	G	223	228	anti-parallel
Strand 4	G	242	245	anti-parallel
Strand 5	G	84	85	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	91	94	first strand
Strand 2	G	236	239	anti-parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	169	176	first strand
Strand 2	G	155	162	anti-parallel
Strand 3	G	129	133	anti-parallel
Strand 4	G	189	193	anti-parallel
Strand 5	G	181	183	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	199	203	first strand
Strand 2	G	431	435	parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	271	273	first strand
Strand 2	G	284	287	anti-parallel
Strand 3	G	453	456	anti-parallel
Strand 4	G	468	470	anti-parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	384	385	first strand
Strand 2	G	413	419	anti-parallel
Strand 3	G	330	334	anti-parallel
Strand 4	G	292	298	anti-parallel
Strand 5	G	443	449	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	304	307	first strand
Strand 2	G	317	320	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	377	378	first strand
Strand 2	G	381	382	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	35	40	first strand
Strand 2	K	494	499	anti-parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	45	46	first strand
Strand 2	K	487	491	anti-parallel
Strand 3	K	223	228	anti-parallel
Strand 4	K	242	245	anti-parallel
Strand 5	K	84	85	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	91	94	first strand
Strand 2	K	236	239	anti-parallel

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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	169	176	first strand
Strand 2	K	155	162	anti-parallel
Strand 3	K	129	133	anti-parallel
Strand 4	K	189	193	anti-parallel
Strand 5	K	181	183	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	200	203	first strand
Strand 2	K	432	435	parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	259	261	first strand
Strand 2	K	443	456	anti-parallel
Strand 3	K	465	469	anti-parallel
Strand 4	K	358	361	parallel

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There are 8 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	271	273	first strand
Strand 2	K	284	287	anti-parallel
Strand 3	K	443	456	anti-parallel
Strand 4	K	292	298	anti-parallel
Strand 5	K	330	334	anti-parallel
Strand 6	K	413	420	anti-parallel
Strand 7	K	381	385	anti-parallel
Strand 8	K	374	378	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	302	307	first strand
Strand 2	K	317	322	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	R	35	40	first strand
Strand 2	R	494	499	anti-parallel

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There are 5 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	R	45	46	first strand
Strand 2	R	487	491	anti-parallel
Strand 3	R	223	228	anti-parallel
Strand 4	R	242	245	anti-parallel
Strand 5	R	84	85	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	R	91	94	first strand
Strand 2	R	236	239	anti-parallel

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There are 5 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	R	169	176	first strand
Strand 2	R	155	162	anti-parallel
Strand 3	R	129	133	anti-parallel
Strand 4	R	189	193	anti-parallel
Strand 5	R	181	183	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	R	200	203	first strand
Strand 2	R	432	435	parallel

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There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	R	271	273	first strand
Strand 2	R	284	287	anti-parallel
Strand 3	R	453	454	anti-parallel

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There are 6 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	R	374	378	first strand
Strand 2	R	381	385	anti-parallel
Strand 3	R	413	420	anti-parallel
Strand 4	R	330	334	anti-parallel
Strand 5	R	292	298	anti-parallel
Strand 6	R	443	449	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	R	302	307	first strand
Strand 2	R	317	322	anti-parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	R	360	361	first strand
Strand 2	R	467	468	parallel

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There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	3	7	first strand
Strand 2	A	21	25	anti-parallel
Strand 3	A	77	82	anti-parallel
Strand 4	A	67	72	anti-parallel

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There are 6 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	11	12	first strand
Strand 2	A	126	130	parallel
Strand 3	A	88	100	anti-parallel
Strand 4	A	33	39	anti-parallel
Strand 5	A	45	51	anti-parallel
Strand 6	A	58	59	anti-parallel

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There are 4 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	11	12	first strand
Strand 2	A	126	130	parallel
Strand 3	A	88	100	anti-parallel
Strand 4	A	100	100	anti-parallel

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There are 4 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	3	7	first strand
Strand 2	F	21	25	anti-parallel
Strand 3	F	77	82	anti-parallel
Strand 4	F	67	72	anti-parallel

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There are 6 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	11	12	first strand
Strand 2	F	107	111	parallel
Strand 3	F	88	100	anti-parallel
Strand 4	F	33	39	anti-parallel
Strand 5	F	45	51	anti-parallel
Strand 6	F	58	59	anti-parallel

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There are 4 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	11	12	first strand
Strand 2	F	107	111	parallel
Strand 3	F	88	100	anti-parallel
Strand 4	F	100	100	anti-parallel

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There are 4 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	3	7	first strand
Strand 2	O	21	25	anti-parallel
Strand 3	O	77	82	anti-parallel
Strand 4	O	67	72	anti-parallel

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There are 6 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	11	12	first strand
Strand 2	O	107	111	parallel
Strand 3	O	88	100	anti-parallel
Strand 4	O	33	39	anti-parallel
Strand 5	O	45	51	anti-parallel
Strand 6	O	58	59	anti-parallel

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There are 4 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	11	12	first strand
Strand 2	O	107	111	parallel
Strand 3	O	88	100	anti-parallel
Strand 4	O	100	100	anti-parallel

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There are 5 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	9	11	first strand
Strand 2	B	102	104	parallel
Strand 3	B	85	89	anti-parallel
Strand 4	B	34	38	anti-parallel
Strand 5	B	45	49	anti-parallel

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There are 3 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	19	22	first strand
Strand 2	B	72	75	anti-parallel
Strand 3	B	62	63	anti-parallel

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There are 5 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	9	11	first strand
Strand 2	I	102	104	parallel
Strand 3	I	85	89	anti-parallel
Strand 4	I	34	38	anti-parallel
Strand 5	I	45	49	anti-parallel

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There are 3 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	19	22	first strand
Strand 2	I	72	75	anti-parallel
Strand 3	I	62	63	anti-parallel

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There are 5 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	9	11	first strand
Strand 2	P	102	104	parallel
Strand 3	P	85	89	anti-parallel
Strand 4	P	34	38	anti-parallel
Strand 5	P	45	49	anti-parallel

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There are 3 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	19	22	first strand
Strand 2	P	72	75	anti-parallel
Strand 3	P	62	63	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6ORN

Analysis of interatomic Contacts of Structural Units in PDB entry:
6ORN