Analysis of interatomic Contacts of Structural Units in PDB entry:
6ORO

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6ORO entry

There are 12 chains in PDB entry 6ORO (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	VAL 518	ASP 664
B	ALA 31	VAL 505
C	VAL 518	ASP 664
D	GLU 1	ALA 114
E	GLN 1	LEU 107
F	VAL 518	ASP 664
G	ALA 31	VAL 505
H	GLU 1	ALA 114
I	ALA 31	VAL 505
J	GLU 1	ALA 114
K	GLN 1	LEU 107
L	GLN 1	LEU 107

There are 43 helices in PDB entry 6ORO. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	529	534	Right-handed alpha
Helix 2	AA2	A	538	543	Right-handed alpha
Helix 3	AA3	A	572	595	Right-handed alpha
Helix 4	AA4	A	619	624	Right-handed alpha
Helix 5	AA5	A	627	635	Right-handed alpha
Helix 6	AA6	A	641	649	Right-handed alpha
Helix 7	AA7	A	650	659	Right-handed alpha
Helix 8	AA8	B	105	113	Right-handed alpha
Helix 9	AA9	B	114	117	Right-handed 310
Helix 10	AB1	B	177	179	Right-handed 310
Helix 11	AB2	B	334	349	Right-handed alpha
Helix 12	AB3	B	350	353	Right-handed 310
Helix 13	AB4	B	368	373	Right-handed alpha
Helix 14	AB5	B	474	480	Right-handed 310
Helix 15	AB6	C	529	534	Right-handed alpha
Helix 16	AB7	C	538	543	Right-handed alpha
Helix 17	AB8	C	572	595	Right-handed alpha
Helix 18	AB9	C	619	624	Right-handed alpha
Helix 19	AC1	C	627	635	Right-handed alpha
Helix 20	AC2	C	641	649	Right-handed alpha
Helix 21	AC3	C	650	659	Right-handed alpha
Helix 22	AC4	F	529	534	Right-handed alpha
Helix 23	AC5	F	538	543	Right-handed alpha
Helix 24	AC6	F	572	595	Right-handed alpha
Helix 25	AC7	F	619	624	Right-handed alpha
Helix 26	AC8	F	627	635	Right-handed alpha
Helix 27	AC9	F	641	649	Right-handed alpha
Helix 28	AD1	F	650	659	Right-handed alpha
Helix 29	AD2	G	105	113	Right-handed alpha
Helix 30	AD3	G	114	117	Right-handed 310
Helix 31	AD4	G	139	151	Right-handed 310
Helix 32	AD5	G	177	179	Right-handed 310
Helix 33	AD6	G	334	349	Right-handed alpha
Helix 34	AD7	G	350	353	Right-handed 310
Helix 35	AD8	G	368	373	Right-handed alpha
Helix 36	AD9	G	474	480	Right-handed 310
Helix 37	AE1	I	105	113	Right-handed alpha
Helix 38	AE2	I	114	117	Right-handed 310
Helix 39	AE3	I	177	179	Right-handed 310
Helix 40	AE4	I	334	349	Right-handed alpha
Helix 41	AE5	I	350	353	Right-handed 310
Helix 42	AE6	I	368	373	Right-handed alpha
Helix 43	AE7	I	474	480	Right-handed 310

There are 42 sheets in PDB entry 6ORO. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	603	609	first strand
Strand 2	B	35	40	anti-parallel
Strand 3	B	494	499	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	45	47	first strand
Strand 2	B	487	491	anti-parallel
Strand 3	B	223	228	anti-parallel
Strand 4	B	242	245	anti-parallel
Strand 5	B	84	85	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	53	54	first strand
Strand 2	B	217	218	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	91	93	first strand
Strand 2	B	237	239	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	169	175	first strand
Strand 2	B	156	162	anti-parallel
Strand 3	B	129	132	anti-parallel
Strand 4	B	190	193	anti-parallel
Strand 5	B	181	183	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	259	261	first strand
Strand 2	B	447	456	anti-parallel
Strand 3	B	292	294	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	284	286	first strand
Strand 2	B	447	456	anti-parallel
Strand 3	B	467	470	anti-parallel
Strand 4	B	360	361	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	297	298	first strand
Strand 2	B	443	444	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	304	308	first strand
Strand 2	B	316	320	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	329	333	first strand
Strand 2	B	414	421	anti-parallel
Strand 3	B	382	384	anti-parallel
Strand 4	B	375	377	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	603	609	first strand
Strand 2	G	35	40	anti-parallel
Strand 3	G	494	499	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	5	7	first strand
Strand 2	D	18	23	anti-parallel
Strand 3	D	77	82	anti-parallel
Strand 4	D	68	72	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	46	48	first strand
Strand 2	D	36	39	anti-parallel
Strand 3	D	89	92	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	19	22	first strand
Strand 2	E	70	75	anti-parallel
Strand 3	E	62	67	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	88	91	first strand
Strand 2	E	97	99	anti-parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	603	609	first strand
Strand 2	I	35	40	anti-parallel
Strand 3	I	494	499	anti-parallel

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There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	45	47	first strand
Strand 2	G	487	491	anti-parallel
Strand 3	G	223	228	anti-parallel
Strand 4	G	242	245	anti-parallel
Strand 5	G	84	85	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	53	54	first strand
Strand 2	G	217	218	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	91	93	first strand
Strand 2	G	237	239	anti-parallel

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There are 5 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	169	175	first strand
Strand 2	G	156	162	anti-parallel
Strand 3	G	129	132	anti-parallel
Strand 4	G	190	193	anti-parallel
Strand 5	G	181	183	anti-parallel

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There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	259	261	first strand
Strand 2	G	447	456	anti-parallel
Strand 3	G	292	294	anti-parallel

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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	284	286	first strand
Strand 2	G	447	456	anti-parallel
Strand 3	G	467	470	anti-parallel
Strand 4	G	360	361	parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	297	298	first strand
Strand 2	G	443	444	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	304	307	first strand
Strand 2	G	317	320	anti-parallel

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There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	329	333	first strand
Strand 2	G	414	421	anti-parallel
Strand 3	G	382	384	anti-parallel
Strand 4	G	375	377	anti-parallel

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There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	5	7	first strand
Strand 2	H	18	23	anti-parallel
Strand 3	H	77	82	anti-parallel
Strand 4	H	68	72	anti-parallel

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There are 3 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	46	48	first strand
Strand 2	H	36	39	anti-parallel
Strand 3	H	89	92	anti-parallel

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There are 5 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	45	47	first strand
Strand 2	I	487	491	anti-parallel
Strand 3	I	223	228	anti-parallel
Strand 4	I	242	245	anti-parallel
Strand 5	I	84	85	anti-parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	53	54	first strand
Strand 2	I	217	218	anti-parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	91	93	first strand
Strand 2	I	237	239	anti-parallel

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There are 5 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	169	175	first strand
Strand 2	I	156	162	anti-parallel
Strand 3	I	129	132	anti-parallel
Strand 4	I	190	193	anti-parallel
Strand 5	I	181	183	anti-parallel

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There are 3 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	259	261	first strand
Strand 2	I	447	456	anti-parallel
Strand 3	I	292	294	anti-parallel

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There are 4 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	284	286	first strand
Strand 2	I	447	456	anti-parallel
Strand 3	I	467	470	anti-parallel
Strand 4	I	360	361	parallel

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There are 2 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	297	298	first strand
Strand 2	I	443	444	anti-parallel

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There are 2 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	304	308	first strand
Strand 2	I	316	320	anti-parallel

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There are 4 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	329	333	first strand
Strand 2	I	414	421	anti-parallel
Strand 3	I	382	384	anti-parallel
Strand 4	I	375	377	anti-parallel

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There are 4 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	5	7	first strand
Strand 2	J	18	23	anti-parallel
Strand 3	J	77	82	anti-parallel
Strand 4	J	68	72	anti-parallel

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There are 3 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	46	48	first strand
Strand 2	J	36	39	anti-parallel
Strand 3	J	89	92	anti-parallel

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There are 3 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	19	22	first strand
Strand 2	K	70	75	anti-parallel
Strand 3	K	62	67	anti-parallel

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There are 2 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	88	91	first strand
Strand 2	K	97	99	anti-parallel

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There are 3 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	19	22	first strand
Strand 2	L	70	75	anti-parallel
Strand 3	L	62	67	anti-parallel

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There are 2 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	88	91	first strand
Strand 2	L	97	99	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6ORO

Analysis of interatomic Contacts of Structural Units in PDB entry:
6ORO