Analysis of interatomic Contacts of Structural Units in PDB entry:
6ORP

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6ORP entry

There are 12 chains in PDB entry 6ORP (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	VAL 518	ASP 664
B	ALA 31	VAL 505
C	VAL 518	ASP 664
D	GLU 1	ALA 114
E	SER 2	LEU 107
F	VAL 518	ASP 664
G	ALA 31	VAL 505
H	GLU 1	ALA 114
I	ALA 31	VAL 505
J	GLU 1	ALA 114
K	SER 2	LEU 107
L	SER 2	LEU 107

There are 42 helices in PDB entry 6ORP. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	529	534	Right-handed alpha
Helix 2	AA2	A	537	543	Right-handed alpha
Helix 3	AA3	A	572	595	Right-handed alpha
Helix 4	AA4	A	618	625	Right-handed alpha
Helix 5	AA5	A	627	632	Right-handed alpha
Helix 6	AA6	A	638	648	Right-handed alpha
Helix 7	AA7	A	652	661	Right-handed alpha
Helix 8	AA8	B	99	116	Right-handed alpha
Helix 9	AA9	B	335	350	Right-handed alpha
Helix 10	AB1	B	351	353	Right-handed 310
Helix 11	AB2	B	368	373	Right-handed alpha
Helix 12	AB3	B	475	481	Right-handed alpha
Helix 13	AB4	C	529	534	Right-handed alpha
Helix 14	AB5	C	537	546	Right-handed alpha
Helix 15	AB6	C	572	595	Right-handed alpha
Helix 16	AB7	C	618	625	Right-handed alpha
Helix 17	AB8	C	627	632	Right-handed alpha
Helix 18	AB9	C	638	649	Right-handed alpha
Helix 19	AC1	C	652	661	Right-handed alpha
Helix 20	AC2	D	28	32	Right-handed 310
Helix 21	AC3	E	26	29	Right-handed alpha
Helix 22	AC4	F	529	534	Right-handed alpha
Helix 23	AC5	F	537	543	Right-handed alpha
Helix 24	AC6	F	571	595	Right-handed alpha
Helix 25	AC7	F	618	625	Right-handed alpha
Helix 26	AC8	F	627	632	Right-handed alpha
Helix 27	AC9	F	638	648	Right-handed alpha
Helix 28	AD1	F	652	661	Right-handed alpha
Helix 29	AD2	G	99	116	Right-handed alpha
Helix 30	AD3	G	335	350	Right-handed alpha
Helix 31	AD4	G	351	353	Right-handed 310
Helix 32	AD5	G	368	373	Right-handed alpha
Helix 33	AD6	G	476	481	Right-handed alpha
Helix 34	AD7	H	28	32	Right-handed 310
Helix 35	AD8	I	99	116	Right-handed alpha
Helix 36	AD9	I	335	350	Right-handed alpha
Helix 37	AE1	I	351	353	Right-handed 310
Helix 38	AE2	I	368	373	Right-handed alpha
Helix 39	AE3	I	476	481	Right-handed alpha
Helix 40	AE4	J	28	32	Right-handed 310
Helix 41	AE5	K	26	29	Right-handed alpha
Helix 42	AE6	L	26	29	Right-handed alpha

There are 43 sheets in PDB entry 6ORP. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	35	46	first strand
Strand 2	B	487	499	anti-parallel
Strand 3	B	223	228	anti-parallel
Strand 4	B	242	245	anti-parallel
Strand 5	B	84	85	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	75	76	first strand
Strand 2	B	53	56	parallel
Strand 3	B	216	218	anti-parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	172	176	first strand
Strand 2	B	155	159	anti-parallel
Strand 3	B	129	133	anti-parallel
Strand 4	B	189	193	anti-parallel
Strand 5	B	181	184	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	202	203	first strand
Strand 2	B	434	435	parallel
Strand 3	B	423	424	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	259	261	first strand
Strand 2	B	443	456	anti-parallel
Strand 3	B	292	298	anti-parallel

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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	271	273	first strand
Strand 2	B	284	287	anti-parallel
Strand 3	B	443	456	anti-parallel
Strand 4	B	466	469	anti-parallel
Strand 5	B	359	361	parallel
Strand 6	B	394	395	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	304	307	first strand
Strand 2	B	317	320	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	329	334	first strand
Strand 2	B	413	420	anti-parallel
Strand 3	B	383	385	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	6	8	first strand
Strand 2	D	21	23	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	17	18	first strand
Strand 2	D	81	82	anti-parallel
Strand 3	D	68	70	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	47	49	first strand
Strand 2	D	35	40	anti-parallel
Strand 3	D	90	95	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	19	24	first strand
Strand 2	E	70	75	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	90	92	first strand
Strand 2	E	95	97	anti-parallel

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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	35	46	first strand
Strand 2	G	487	499	anti-parallel
Strand 3	G	223	228	anti-parallel
Strand 4	G	242	245	anti-parallel
Strand 5	G	84	85	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	75	76	first strand
Strand 2	G	53	56	parallel
Strand 3	G	216	218	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	92	94	first strand
Strand 2	G	236	238	anti-parallel

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There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	169	176	first strand
Strand 2	G	155	162	anti-parallel
Strand 3	G	129	133	anti-parallel
Strand 4	G	189	193	anti-parallel
Strand 5	G	181	183	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	202	203	first strand
Strand 2	G	434	435	parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	256	257	first strand
Strand 2	G	375	376	anti-parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	259	260	first strand
Strand 2	G	450	456	anti-parallel
Strand 3	G	284	287	anti-parallel
Strand 4	G	271	273	anti-parallel

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There are 5 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	259	260	first strand
Strand 2	G	450	456	anti-parallel
Strand 3	G	466	469	anti-parallel
Strand 4	G	359	361	parallel
Strand 5	G	394	395	anti-parallel

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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	383	385	first strand
Strand 2	G	417	420	anti-parallel
Strand 3	G	329	334	anti-parallel
Strand 4	G	413	414	anti-parallel

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There are 5 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	383	385	first strand
Strand 2	G	417	420	anti-parallel
Strand 3	G	329	334	anti-parallel
Strand 4	G	294	298	anti-parallel
Strand 5	G	443	447	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	304	307	first strand
Strand 2	G	317	320	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	6	8	first strand
Strand 2	H	21	23	anti-parallel

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There are 3 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	17	18	first strand
Strand 2	H	81	82	anti-parallel
Strand 3	H	68	70	anti-parallel

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There are 3 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	47	49	first strand
Strand 2	H	35	40	anti-parallel
Strand 3	H	90	95	anti-parallel

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There are 5 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	35	46	first strand
Strand 2	I	487	499	anti-parallel
Strand 3	I	223	228	anti-parallel
Strand 4	I	242	245	anti-parallel
Strand 5	I	84	85	anti-parallel

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There are 3 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	53	55	first strand
Strand 2	I	215	218	anti-parallel
Strand 3	I	247	251	anti-parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	92	94	first strand
Strand 2	I	236	238	anti-parallel

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There are 5 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	169	176	first strand
Strand 2	I	155	162	anti-parallel
Strand 3	I	129	133	anti-parallel
Strand 4	I	189	193	anti-parallel
Strand 5	I	181	183	anti-parallel

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There are 3 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	202	203	first strand
Strand 2	I	434	435	parallel
Strand 3	I	423	424	anti-parallel

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There are 6 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	271	273	first strand
Strand 2	I	284	287	anti-parallel
Strand 3	I	453	456	anti-parallel
Strand 4	I	466	469	anti-parallel
Strand 5	I	359	361	parallel
Strand 6	I	394	395	anti-parallel

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There are 4 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	383	385	first strand
Strand 2	I	417	420	anti-parallel
Strand 3	I	329	334	anti-parallel
Strand 4	I	413	414	anti-parallel

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There are 5 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	383	385	first strand
Strand 2	I	417	420	anti-parallel
Strand 3	I	329	334	anti-parallel
Strand 4	I	292	298	anti-parallel
Strand 5	I	443	449	anti-parallel

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There are 2 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	301	308	first strand
Strand 2	I	316	323	anti-parallel

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There are 2 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	6	8	first strand
Strand 2	J	21	23	anti-parallel

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There are 3 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	17	18	first strand
Strand 2	J	81	82	anti-parallel
Strand 3	J	68	70	anti-parallel

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There are 3 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	47	49	first strand
Strand 2	J	35	40	anti-parallel
Strand 3	J	90	95	anti-parallel

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There are 2 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	19	24	first strand
Strand 2	K	70	75	anti-parallel

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There are 2 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	90	92	first strand
Strand 2	K	95	97	anti-parallel

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There are 2 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	19	24	first strand
Strand 2	L	70	75	anti-parallel

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There are 2 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	90	92	first strand
Strand 2	L	95	97	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6ORP

Analysis of interatomic Contacts of Structural Units in PDB entry:
6ORP