Analysis of interatomic Contacts of Structural Units in PDB entry:
6ORQ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6ORQ entry

There are 12 chains in PDB entry 6ORQ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	VAL 518	ASP 664
B	ALA 31	VAL 505
C	VAL 518	ASP 664
D	GLU 1	ALA 114
E	ILE 2	ARG 108
F	VAL 518	ASP 664
G	ALA 31	VAL 505
H	GLU 1	ALA 114
I	ALA 31	VAL 505
J	GLU 1	ALA 114
K	ILE 2	ARG 108
L	ILE 2	ARG 108

There are 58 helices in PDB entry 6ORQ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	529	535	Right-handed alpha
Helix 2	AA2	A	538	543	Right-handed alpha
Helix 3	AA3	A	572	595	Right-handed alpha
Helix 4	AA4	A	620	624	Right-handed 310
Helix 5	AA5	A	627	635	Right-handed alpha
Helix 6	AA6	A	638	652	Right-handed alpha
Helix 7	AA7	A	652	657	Right-handed alpha
Helix 8	AA8	A	657	662	Right-handed alpha
Helix 9	AA9	B	59	64	Right-handed alpha
Helix 10	AB1	B	65	67	Right-handed 310
Helix 11	AB2	B	99	117	Right-handed alpha
Helix 12	AB3	B	134	139	Right-handed 310
Helix 13	AB4	B	177	181	Right-handed 310
Helix 14	AB5	B	334	351	Right-handed alpha
Helix 15	AB6	B	352	354	Right-handed 310
Helix 16	AB7	B	368	372	Right-handed 310
Helix 17	AB8	B	425	429	Right-handed 310
Helix 18	AB9	B	475	483	Right-handed alpha
Helix 19	AC1	C	529	535	Right-handed alpha
Helix 20	AC2	C	538	543	Right-handed alpha
Helix 21	AC3	C	572	595	Right-handed alpha
Helix 22	AC4	C	620	624	Right-handed 310
Helix 23	AC5	C	627	635	Right-handed alpha
Helix 24	AC6	C	638	652	Right-handed alpha
Helix 25	AC7	C	652	657	Right-handed alpha
Helix 26	AC8	C	657	662	Right-handed alpha
Helix 27	AC9	E	79	83	Right-handed 310
Helix 28	AD1	F	529	535	Right-handed alpha
Helix 29	AD2	F	538	543	Right-handed alpha
Helix 30	AD3	F	572	595	Right-handed alpha
Helix 31	AD4	F	620	624	Right-handed 310
Helix 32	AD5	F	627	635	Right-handed alpha
Helix 33	AD6	F	638	652	Right-handed alpha
Helix 34	AD7	F	652	657	Right-handed alpha
Helix 35	AD8	F	657	662	Right-handed alpha
Helix 36	AD9	G	59	64	Right-handed alpha
Helix 37	AE1	G	65	67	Right-handed 310
Helix 38	AE2	G	99	117	Right-handed alpha
Helix 39	AE3	G	134	139	Right-handed 310
Helix 40	AE4	G	177	179	Right-handed 310
Helix 41	AE5	G	334	350	Right-handed alpha
Helix 42	AE6	G	351	354	Right-handed 310
Helix 43	AE7	G	368	373	Right-handed alpha
Helix 44	AE8	G	425	429	Right-handed 310
Helix 45	AE9	G	475	483	Right-handed alpha
Helix 46	AF1	I	59	64	Right-handed alpha
Helix 47	AF2	I	65	67	Right-handed 310
Helix 48	AF3	I	99	117	Right-handed alpha
Helix 49	AF4	I	134	139	Right-handed 310
Helix 50	AF5	I	177	179	Right-handed 310
Helix 51	AF6	I	334	350	Right-handed alpha
Helix 52	AF7	I	351	354	Right-handed 310
Helix 53	AF8	I	368	372	Right-handed 310
Helix 54	AF9	I	387	390	Right-handed 310
Helix 55	AG1	I	425	429	Right-handed 310
Helix 56	AG2	I	475	481	Right-handed alpha
Helix 57	AG3	K	79	83	Right-handed 310
Helix 58	AG4	L	79	83	Right-handed 310

There are 51 sheets in PDB entry 6ORQ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1, AF2, AF3, AF4, AF5, AF6,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	603	609	first strand
Strand 2	B	35	40	anti-parallel
Strand 3	B	494	499	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	45	46	first strand
Strand 2	B	487	491	anti-parallel
Strand 3	B	223	228	anti-parallel
Strand 4	B	242	245	anti-parallel
Strand 5	B	84	85	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	53	54	first strand
Strand 2	B	217	218	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	92	93	first strand
Strand 2	B	237	238	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	130	131	first strand
Strand 2	B	156	158	anti-parallel
Strand 3	B	174	175	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	160	162	first strand
Strand 2	B	169	171	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	182	183	first strand
Strand 2	B	191	192	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	202	203	first strand
Strand 2	B	434	435	parallel
Strand 3	B	423	424	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	259	261	first strand
Strand 2	B	444	454	anti-parallel
Strand 3	B	284	287	anti-parallel
Strand 4	B	271	273	anti-parallel

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There are 7 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	259	261	first strand
Strand 2	B	444	454	anti-parallel
Strand 3	B	292	297	anti-parallel
Strand 4	B	330	332	anti-parallel
Strand 5	B	416	420	anti-parallel
Strand 6	B	381	385	anti-parallel
Strand 7	B	374	378	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	305	308	first strand
Strand 2	B	316	319	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	394	395	first strand
Strand 2	B	359	361	anti-parallel
Strand 3	B	467	468	parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	603	609	first strand
Strand 2	G	35	40	anti-parallel
Strand 3	G	494	498	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	19	21	first strand
Strand 2	D	79	81	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	48	49	first strand
Strand 2	D	34	37	anti-parallel
Strand 3	D	91	94	anti-parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	45	46	first strand
Strand 2	E	35	38	anti-parallel
Strand 3	E	85	88	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	48	49	first strand
Strand 2	E	53	54	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	63	64	first strand
Strand 2	E	73	74	anti-parallel

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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	603	609	first strand
Strand 2	I	35	40	anti-parallel
Strand 3	I	494	499	anti-parallel

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There are 5 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	45	46	first strand
Strand 2	G	487	491	anti-parallel
Strand 3	G	223	228	anti-parallel
Strand 4	G	242	245	anti-parallel
Strand 5	G	84	85	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	53	54	first strand
Strand 2	G	217	218	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	92	93	first strand
Strand 2	G	237	238	anti-parallel

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There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	130	132	first strand
Strand 2	G	156	158	anti-parallel
Strand 3	G	174	175	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	160	162	first strand
Strand 2	G	169	171	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	181	183	first strand
Strand 2	G	191	193	anti-parallel

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There are 3 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	202	203	first strand
Strand 2	G	434	435	parallel
Strand 3	G	423	424	anti-parallel

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There are 3 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	271	274	first strand
Strand 2	G	284	287	anti-parallel
Strand 3	G	452	454	anti-parallel

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There are 6 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	374	378	first strand
Strand 2	G	381	385	anti-parallel
Strand 3	G	416	420	anti-parallel
Strand 4	G	330	333	anti-parallel
Strand 5	G	292	297	anti-parallel
Strand 6	G	444	449	anti-parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	304	308	first strand
Strand 2	G	316	320	anti-parallel

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There are 3 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	394	395	first strand
Strand 2	G	359	361	anti-parallel
Strand 3	G	467	468	parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	19	21	first strand
Strand 2	H	79	81	anti-parallel

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There are 3 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	48	49	first strand
Strand 2	H	34	37	anti-parallel
Strand 3	H	91	94	anti-parallel

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There are 5 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	45	46	first strand
Strand 2	I	487	491	anti-parallel
Strand 3	I	223	228	anti-parallel
Strand 4	I	242	245	anti-parallel
Strand 5	I	84	85	anti-parallel

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There are 2 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	53	55	first strand
Strand 2	I	216	218	anti-parallel

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There are 2 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	91	93	first strand
Strand 2	I	237	239	anti-parallel

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There are 4 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	121	122	first strand
Strand 2	I	201	203	anti-parallel
Strand 3	I	434	435	parallel
Strand 4	I	423	424	anti-parallel

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There are 3 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	130	132	first strand
Strand 2	I	156	158	anti-parallel
Strand 3	I	174	175	anti-parallel

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There are 2 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	160	162	first strand
Strand 2	I	169	171	anti-parallel

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There are 2 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	181	183	first strand
Strand 2	I	191	193	anti-parallel

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There are 3 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	271	274	first strand
Strand 2	I	284	287	anti-parallel
Strand 3	I	452	454	anti-parallel

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There are 6 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	374	378	first strand
Strand 2	I	381	385	anti-parallel
Strand 3	I	416	420	anti-parallel
Strand 4	I	330	332	anti-parallel
Strand 5	I	292	297	anti-parallel
Strand 6	I	444	449	anti-parallel

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There are 2 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	304	308	first strand
Strand 2	I	316	320	anti-parallel

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There are 3 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	394	395	first strand
Strand 2	I	359	361	anti-parallel
Strand 3	I	467	468	parallel

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There are 2 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	19	21	first strand
Strand 2	J	79	81	anti-parallel

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There are 3 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	48	49	first strand
Strand 2	J	34	37	anti-parallel
Strand 3	J	91	94	anti-parallel

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There are 3 strands in AF1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	45	46	first strand
Strand 2	K	35	38	anti-parallel
Strand 3	K	85	88	anti-parallel

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There are 2 strands in AF2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	48	49	first strand
Strand 2	K	53	54	anti-parallel

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There are 2 strands in AF3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	63	64	first strand
Strand 2	K	73	74	anti-parallel

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There are 3 strands in AF4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	45	46	first strand
Strand 2	L	35	38	anti-parallel
Strand 3	L	85	88	anti-parallel

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There are 2 strands in AF5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	48	49	first strand
Strand 2	L	53	54	anti-parallel

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There are 2 strands in AF6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	63	64	first strand
Strand 2	L	73	74	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6ORQ

Analysis of interatomic Contacts of Structural Units in PDB entry:
6ORQ