Analysis of interatomic Contacts of Structural Units in PDB entry:
6ORT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6ORT entry

There is 1 chain in PDB entry 6ORT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 33GLU 309
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 6ORT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
56 60Right-handed 310
Helix 2
AA2
A
63 67Right-handed 310
Helix 3
AA3
A
117 121Right-handed 310
Helix 4
AA4
A
129 134Right-handed alpha
Helix 5
AA5
A
144 147Right-handed 310
Helix 6
AA6
A
175 179Right-handed 310
Helix 7
AA7
A
231 235Right-handed 310
Helix 8
AA8
A
252 257Right-handed alpha
Helix 9
AA9
A
279 283Right-handed 310
Helix 10
AB1
A
293 296Right-handed 310
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There are 4 sheets in PDB entry 6ORT. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
39 45first strand
Strand 2
A
297 308parallel
Strand 3
A
284 292anti-parallel
Strand 4
A
220 226anti-parallel
Strand 5
A
236 242anti-parallel
Strand 6
A
247 249anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
50 52first strand
Strand 2
A
273 275anti-parallel
Strand 3
A
259 260anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
103 115first strand
Strand 2
A
86 100anti-parallel
Strand 3
A
71 79anti-parallel
Strand 4
A
149 157anti-parallel
Strand 5
A
162 173anti-parallel
Strand 6
A
188 193parallel
Strand 7
A
180 183anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
124 125first strand
Strand 2
A
138 140anti-parallel
Strand 3
A
198 200anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il