Analysis of interatomic Contacts of Structural Units in PDB entry:
6OTE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6OTE entry

There is 1 chain in PDB entry 6OTE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 3LYS 446
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 6OTE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
5 7Right-handed 310
Helix 2
AA2
A
8 26Right-handed alpha
Helix 3
AA3
A
30 51Right-handed alpha
Helix 4
AA4
A
85 87Right-handed 310
Helix 5
AA5
A
88 111Right-handed alpha
Helix 6
AA6
A
124 128Right-handed 310
Helix 7
AA7
A
150 157Right-handed alpha
Helix 8
AA8
A
163 171Right-handed alpha
Helix 9
AA9
A
179 198Right-handed alpha
Helix 10
AB1
A
212 219Right-handed alpha
Helix 11
AB2
A
220 227Right-handed alpha
Helix 12
AB3
A
251 258Right-handed alpha
Helix 13
AB4
A
313 332Right-handed alpha
Helix 14
AB5
A
342 346Right-handed 310
Helix 15
AB6
A
377 384Right-handed alpha
Helix 16
AB7
A
410 421Right-handed alpha
Helix 17
AB8
A
433 438Right-handed 310
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There are 4 sheets in PDB entry 6OTE. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
129 134first strand
Strand 2
A
336 340anti-parallel
Strand 3
A
352 360anti-parallel
Strand 4
A
365 376anti-parallel
Strand 5
A
401 409anti-parallel
Strand 6
A
299 309anti-parallel
Strand 7
A
271 280anti-parallel
Strand 8
A
202 204parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
161 162first strand
Strand 2
A
176 177anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
209 211first strand
Strand 2
A
245 247anti-parallel
Strand 3
A
230 231anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
422 423first strand
Strand 2
A
426 428anti-parallel
Strand 3
A
442 444anti-parallel
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