Analysis of interatomic Contacts of Structural Units in PDB entry:
6OTU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6OTU entry

There is 1 chain in PDB entry 6OTU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 4THR 525
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 6OTU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
5 8Right-handed 310
Helix 2
AA2
A
9 19Right-handed alpha
Helix 3
AA3
A
32 39Right-handed alpha
Helix 4
AA4
A
56 70Right-handed alpha
Helix 5
AA5
A
71 82Right-handed alpha
Helix 6
AA6
A
101 106Right-handed alpha
Helix 7
AA7
A
113 141Right-handed alpha
Helix 8
AA8
A
149 152Right-handed 310
Helix 9
AA9
A
153 165Right-handed alpha
Helix 10
AB1
A
180 189Right-handed alpha
Helix 11
AB2
A
192 194Right-handed 310
Helix 12
AB3
A
207 224Right-handed alpha
Helix 13
AB4
A
228 230Right-handed 310
Helix 14
AB5
A
259 263Right-handed 310
Helix 15
AB6
A
266 278Right-handed alpha
Helix 16
AB7
A
278 296Right-handed alpha
Helix 17
AB8
A
300 303Right-handed 310
Helix 18
AB9
A
304 319Right-handed alpha
Helix 19
AC1
A
331 335Right-handed 310
Helix 20
AC2
A
336 350Right-handed alpha
Helix 21
AC3
A
374 379Right-handed 310
Helix 22
AC4
A
380 387Right-handed alpha
Helix 23
AC5
A
414 432Right-handed alpha
Helix 24
AC6
A
437 441Right-handed 310
Helix 25
AC7
A
457 480Right-handed alpha
Helix 26
AC8
A
486 504Right-handed alpha
Helix 27
AC9
A
513 525Right-handed alpha
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There are 3 sheets in PDB entry 6OTU. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
40 43first strand
Strand 2
A
46 49anti-parallel
Strand 3
A
448 455anti-parallel
Strand 4
A
393 400parallel
Strand 5
A
324 329parallel
Strand 6
A
367 369parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
172 176first strand
Strand 2
A
143 147parallel
Strand 3
A
196 201parallel
Strand 4
A
232 237parallel
Strand 5
A
250 254parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
408 409first strand
Strand 2
A
412 413anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il