Analysis of interatomic Contacts of Structural Units in PDB entry:
6OV2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6OV2 entry

There are 2 chains in PDB entry 6OV2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 5PRO 186
B
 GLU 198ARG 324
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 7 helices in PDB entry 6OV2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
5 26Right-handed alpha
Helix 2
AA2
A
74 99Right-handed alpha
Helix 3
AA3
A
110 145Right-handed alpha
Helix 4
AA4
A
146 149Right-handed 310
Helix 5
AA5
A
161 183Right-handed alpha
Helix 6
AA6
B
211 217Right-handed alpha
Helix 7
AA7
B
267 270Right-handed 310
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There are 3 sheets in PDB entry 6OV2. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
31 35first strand
Strand 2
A
44 48anti-parallel
Strand 3
A
52 56anti-parallel
Strand 4
A
63 66anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
205 210first strand
Strand 2
B
237 244parallel
Strand 3
B
294 302anti-parallel
Strand 4
B
259 265anti-parallel
Strand 5
B
272 277anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
223 227first strand
Strand 2
B
313 318anti-parallel
Strand 3
B
249 255anti-parallel
Strand 4
B
285 291anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il