Analysis of interatomic Contacts of Structural Units in PDB entry:
6OV8

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6OV8 entry

There are 4 chains in PDB entry 6OV8 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASN -1	ALA 427
B	THR 2	ALA 427
C	THR 2	ALA 427
D	MSE 1	ASP 29

There are 97 helices in PDB entry 6OV8. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	39	54	Right-handed alpha
Helix 2	AA2	A	67	79	Right-handed alpha
Helix 3	AA3	A	93	116	Right-handed alpha
Helix 4	AA4	A	122	139	Right-handed alpha
Helix 5	AA5	A	149	155	Right-handed alpha
Helix 6	AA6	A	157	165	Right-handed alpha
Helix 7	AA7	A	208	213	Right-handed alpha
Helix 8	AA8	A	214	218	Right-handed 310
Helix 9	AA9	A	219	235	Right-handed alpha
Helix 10	AB1	A	279	294	Right-handed alpha
Helix 11	AB2	A	306	314	Right-handed alpha
Helix 12	AB3	A	324	338	Right-handed alpha
Helix 13	AB4	A	348	354	Right-handed 310
Helix 14	AB5	A	372	382	Right-handed alpha
Helix 15	AB6	A	383	385	Right-handed 310
Helix 16	AB7	A	417	427	Right-handed alpha
Helix 17	AB8	B	39	54	Right-handed alpha
Helix 18	AB9	B	67	79	Right-handed alpha
Helix 19	AC1	B	93	116	Right-handed alpha
Helix 20	AC2	B	122	136	Right-handed alpha
Helix 21	AC3	B	149	155	Right-handed alpha
Helix 22	AC4	B	157	165	Right-handed alpha
Helix 23	AC5	B	208	213	Right-handed alpha
Helix 24	AC6	B	214	218	Right-handed 310
Helix 25	AC7	B	219	235	Right-handed alpha
Helix 26	AC8	B	279	294	Right-handed alpha
Helix 27	AC9	B	307	314	Right-handed alpha
Helix 28	AD1	B	324	338	Right-handed alpha
Helix 29	AD2	B	348	354	Right-handed 310
Helix 30	AD3	B	372	382	Right-handed alpha
Helix 31	AD4	B	383	385	Right-handed 310
Helix 32	AD5	B	417	426	Right-handed alpha
Helix 33	AD6	C	39	54	Right-handed alpha
Helix 34	AD7	C	67	79	Right-handed alpha
Helix 35	AD8	C	93	116	Right-handed alpha
Helix 36	AD9	C	122	139	Right-handed alpha
Helix 37	AE1	C	149	155	Right-handed alpha
Helix 38	AE2	C	157	165	Right-handed alpha
Helix 39	AE3	C	208	213	Right-handed alpha
Helix 40	AE4	C	214	218	Right-handed 310
Helix 41	AE5	C	219	235	Right-handed alpha
Helix 42	AE6	C	279	294	Right-handed alpha
Helix 43	AE7	C	307	314	Right-handed alpha
Helix 44	AE8	C	324	338	Right-handed alpha
Helix 45	AE9	C	348	354	Right-handed 310
Helix 46	AF1	C	372	382	Right-handed alpha
Helix 47	AF2	C	383	385	Right-handed 310
Helix 48	AF3	C	417	426	Right-handed alpha
Helix 49	AF4	D	39	54	Right-handed alpha
Helix 50	AF5	D	67	79	Right-handed alpha
Helix 51	AF6	D	93	116	Right-handed alpha
Helix 52	AF7	D	117	121	Right-handed 310
Helix 53	AF8	D	122	139	Right-handed alpha
Helix 54	AF9	D	149	155	Right-handed alpha
Helix 55	AG1	D	157	165	Right-handed alpha
Helix 56	AG2	D	208	213	Right-handed alpha
Helix 57	AG3	D	214	218	Right-handed 310
Helix 58	AG4	D	219	235	Right-handed alpha
Helix 59	AG5	D	279	294	Right-handed alpha
Helix 60	AG6	D	307	314	Right-handed alpha
Helix 61	AG7	D	324	338	Right-handed alpha
Helix 62	AG8	D	348	354	Right-handed 310
Helix 63	AG9	D	372	382	Right-handed alpha
Helix 64	AH1	D	383	385	Right-handed 310
Helix 65	AH2	D	417	427	Right-handed alpha
Helix 66	AH3	E	39	53	Right-handed alpha
Helix 67	AH4	E	67	79	Right-handed alpha
Helix 68	AH5	E	93	116	Right-handed alpha
Helix 69	AH6	E	122	139	Right-handed alpha
Helix 70	AH7	E	149	155	Right-handed alpha
Helix 71	AH8	E	157	165	Right-handed alpha
Helix 72	AH9	E	208	213	Right-handed alpha
Helix 73	AI1	E	214	218	Right-handed 310
Helix 74	AI2	E	219	235	Right-handed alpha
Helix 75	AI3	E	279	294	Right-handed alpha
Helix 76	AI4	E	307	314	Right-handed alpha
Helix 77	AI5	E	324	338	Right-handed alpha
Helix 78	AI6	E	348	354	Right-handed 310
Helix 79	AI7	E	372	382	Right-handed alpha
Helix 80	AI8	E	383	385	Right-handed 310
Helix 81	AI9	E	417	427	Right-handed alpha
Helix 82	AJ1	F	39	54	Right-handed alpha
Helix 83	AJ2	F	67	79	Right-handed alpha
Helix 84	AJ3	F	93	116	Right-handed alpha
Helix 85	AJ4	F	122	139	Right-handed alpha
Helix 86	AJ5	F	149	155	Right-handed alpha
Helix 87	AJ6	F	157	165	Right-handed alpha
Helix 88	AJ7	F	208	213	Right-handed alpha
Helix 89	AJ8	F	214	218	Right-handed 310
Helix 90	AJ9	F	219	235	Right-handed alpha
Helix 91	AK1	F	279	293	Right-handed alpha
Helix 92	AK2	F	307	314	Right-handed alpha
Helix 93	AK3	F	324	338	Right-handed alpha
Helix 94	AK4	F	348	354	Right-handed 310
Helix 95	AK5	F	372	382	Right-handed alpha
Helix 96	AK6	F	383	385	Right-handed 310
Helix 97	AK7	F	417	427	Right-handed alpha

There are 24 sheets in PDB entry 6OV8. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	24	27	first strand
Strand 2	A	30	34	anti-parallel
Strand 3	A	5	10	parallel
Strand 4	A	58	61	parallel
Strand 5	A	86	88	parallel

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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	142	148	first strand
Strand 2	A	172	178	anti-parallel
Strand 3	A	240	250	anti-parallel
Strand 4	A	188	200	parallel
Strand 5	A	298	303	parallel
Strand 6	A	392	396	parallel
Strand 7	A	318	321	anti-parallel
Strand 8	A	342	344	parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	262	264	first strand
Strand 2	A	270	272	anti-parallel
Strand 3	A	362	363	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	401	402	first strand
Strand 2	A	412	413	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	24	27	first strand
Strand 2	B	30	34	anti-parallel
Strand 3	B	5	10	parallel
Strand 4	B	58	61	parallel
Strand 5	B	86	88	parallel

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There are 8 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	142	148	first strand
Strand 2	B	172	178	anti-parallel
Strand 3	B	240	250	anti-parallel
Strand 4	B	188	200	parallel
Strand 5	B	298	303	parallel
Strand 6	B	392	396	parallel
Strand 7	B	318	321	anti-parallel
Strand 8	B	342	344	parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	262	264	first strand
Strand 2	B	270	272	anti-parallel
Strand 3	B	362	363	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	401	402	first strand
Strand 2	B	412	413	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	24	26	first strand
Strand 2	C	30	34	anti-parallel
Strand 3	C	5	10	parallel
Strand 4	C	58	61	parallel
Strand 5	C	86	88	parallel

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There are 8 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	142	148	first strand
Strand 2	C	172	178	anti-parallel
Strand 3	C	240	250	anti-parallel
Strand 4	C	188	200	parallel
Strand 5	C	298	303	parallel
Strand 6	C	392	396	parallel
Strand 7	C	318	321	anti-parallel
Strand 8	C	342	344	parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	262	264	first strand
Strand 2	C	270	272	anti-parallel
Strand 3	C	362	363	parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	401	402	first strand
Strand 2	C	412	413	anti-parallel

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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	24	26	first strand
Strand 2	D	30	34	anti-parallel
Strand 3	D	5	10	parallel
Strand 4	D	58	61	parallel
Strand 5	D	86	88	parallel

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There are 8 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	142	148	first strand
Strand 2	D	172	178	anti-parallel
Strand 3	D	240	250	anti-parallel
Strand 4	D	188	200	parallel
Strand 5	D	298	303	parallel
Strand 6	D	392	396	parallel
Strand 7	D	318	321	anti-parallel
Strand 8	D	342	344	parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	262	264	first strand
Strand 2	D	270	272	anti-parallel
Strand 3	D	362	363	parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	401	402	first strand
Strand 2	D	412	413	anti-parallel

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There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	24	26	first strand
Strand 2	E	30	34	anti-parallel
Strand 3	E	5	10	parallel
Strand 4	E	58	61	parallel
Strand 5	E	86	88	parallel

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There are 8 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	142	148	first strand
Strand 2	E	172	178	anti-parallel
Strand 3	E	240	250	anti-parallel
Strand 4	E	188	200	parallel
Strand 5	E	298	303	parallel
Strand 6	E	392	396	parallel
Strand 7	E	318	321	anti-parallel
Strand 8	E	342	344	parallel

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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	262	264	first strand
Strand 2	E	270	272	anti-parallel
Strand 3	E	362	363	parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	401	402	first strand
Strand 2	E	412	413	anti-parallel

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There are 5 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	24	26	first strand
Strand 2	F	30	34	anti-parallel
Strand 3	F	5	10	parallel
Strand 4	F	58	61	parallel
Strand 5	F	86	88	parallel

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There are 8 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	142	148	first strand
Strand 2	F	172	178	anti-parallel
Strand 3	F	241	250	anti-parallel
Strand 4	F	190	200	parallel
Strand 5	F	298	303	parallel
Strand 6	F	392	396	parallel
Strand 7	F	318	321	anti-parallel
Strand 8	F	342	344	parallel

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There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	262	264	first strand
Strand 2	F	270	272	anti-parallel
Strand 3	F	362	363	parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	401	402	first strand
Strand 2	F	412	413	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6OV8

Analysis of interatomic Contacts of Structural Units in PDB entry:
6OV8