Analysis of interatomic Contacts of Structural Units in PDB entry:
6OVG

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6OVG entry

There are 16 chains in PDB entry 6OVG (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLY 10	THR 211
A	TYR 213	PRO 399
B	GLY 10	THR 211
B	TYR 213	PRO 399
C	GLY 10	THR 211
C	TYR 213	PRO 400
D	GLY 10	THR 211
D	TYR 213	PRO 399
E	GLY 10	THR 211
E	TYR 213	PRO 399
F	GLY 10	THR 211
F	TYR 213	PRO 400
G	GLY 10	THR 211
G	TYR 213	PRO 400
H	GLY 10	THR 211
H	TYR 213	PRO 399

There are128 helices in PDB entry 6OVG. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	17	25	Right-handed alpha
Helix 2	AA2	A	28	32	Right-handed 310
Helix 3	AA3	A	65	79	Right-handed alpha
Helix 4	AA4	A	89	99	Right-handed alpha
Helix 5	AA5	A	114	124	Right-handed alpha
Helix 6	AA6	A	125	129	Right-handed 310
Helix 7	AA7	A	139	147	Right-handed alpha
Helix 8	AA8	A	168	178	Right-handed alpha
Helix 9	AA9	A	229	244	Right-handed alpha
Helix 10	AB1	A	248	260	Right-handed alpha
Helix 11	AB2	A	261	282	Right-handed alpha
Helix 12	AB3	A	299	307	Right-handed alpha
Helix 13	AB4	A	321	332	Right-handed alpha
Helix 14	AB5	A	360	368	Right-handed alpha
Helix 15	AB6	A	382	398	Right-handed alpha
Helix 16	AB7	B	17	25	Right-handed alpha
Helix 17	AB8	B	28	32	Right-handed 310
Helix 18	AB9	B	60	64	Right-handed 310
Helix 19	AC1	B	65	80	Right-handed alpha
Helix 20	AC2	B	89	99	Right-handed alpha
Helix 21	AC3	B	114	124	Right-handed alpha
Helix 22	AC4	B	125	129	Right-handed 310
Helix 23	AC5	B	141	147	Right-handed alpha
Helix 24	AC6	B	168	177	Right-handed alpha
Helix 25	AC7	B	229	244	Right-handed alpha
Helix 26	AC8	B	248	260	Right-handed alpha
Helix 27	AC9	B	261	282	Right-handed alpha
Helix 28	AD1	B	299	307	Right-handed alpha
Helix 29	AD2	B	321	332	Right-handed alpha
Helix 30	AD3	B	360	368	Right-handed alpha
Helix 31	AD4	B	382	398	Right-handed alpha
Helix 32	AD5	C	17	25	Right-handed alpha
Helix 33	AD6	C	28	32	Right-handed 310
Helix 34	AD7	C	65	80	Right-handed alpha
Helix 35	AD8	C	89	99	Right-handed alpha
Helix 36	AD9	C	114	124	Right-handed alpha
Helix 37	AE1	C	125	129	Right-handed 310
Helix 38	AE2	C	168	177	Right-handed alpha
Helix 39	AE3	C	197	202	Right-handed 310
Helix 40	AE4	C	229	244	Right-handed alpha
Helix 41	AE5	C	248	260	Right-handed alpha
Helix 42	AE6	C	261	282	Right-handed alpha
Helix 43	AE7	C	299	307	Right-handed alpha
Helix 44	AE8	C	321	332	Right-handed alpha
Helix 45	AE9	C	360	368	Right-handed alpha
Helix 46	AF1	C	382	398	Right-handed alpha
Helix 47	AF2	D	17	25	Right-handed alpha
Helix 48	AF3	D	28	32	Right-handed 310
Helix 49	AF4	D	65	79	Right-handed alpha
Helix 50	AF5	D	89	99	Right-handed alpha
Helix 51	AF6	D	114	124	Right-handed alpha
Helix 52	AF7	D	125	129	Right-handed 310
Helix 53	AF8	D	139	143	Right-handed 310
Helix 54	AF9	D	168	177	Right-handed alpha
Helix 55	AG1	D	178	180	Right-handed 310
Helix 56	AG2	D	198	202	Right-handed 310
Helix 57	AG3	D	229	244	Right-handed alpha
Helix 58	AG4	D	248	260	Right-handed alpha
Helix 59	AG5	D	261	282	Right-handed alpha
Helix 60	AG6	D	299	307	Right-handed alpha
Helix 61	AG7	D	321	332	Right-handed alpha
Helix 62	AG8	D	382	396	Right-handed alpha
Helix 63	AG9	E	17	25	Right-handed alpha
Helix 64	AH1	E	28	32	Right-handed 310
Helix 65	AH2	E	65	79	Right-handed alpha
Helix 66	AH3	E	89	99	Right-handed alpha
Helix 67	AH4	E	114	124	Right-handed alpha
Helix 68	AH5	E	125	129	Right-handed 310
Helix 69	AH6	E	142	147	Right-handed alpha
Helix 70	AH7	E	168	179	Right-handed alpha
Helix 71	AH8	E	197	202	Right-handed 310
Helix 72	AH9	E	229	244	Right-handed alpha
Helix 73	AI1	E	248	260	Right-handed alpha
Helix 74	AI2	E	261	282	Right-handed alpha
Helix 75	AI3	E	299	307	Right-handed alpha
Helix 76	AI4	E	321	332	Right-handed alpha
Helix 77	AI5	E	363	368	Right-handed alpha
Helix 78	AI6	E	382	398	Right-handed alpha
Helix 79	AI7	F	17	25	Right-handed alpha
Helix 80	AI8	F	28	32	Right-handed 310
Helix 81	AI9	F	65	80	Right-handed alpha
Helix 82	AJ1	F	89	99	Right-handed alpha
Helix 83	AJ2	F	114	124	Right-handed alpha
Helix 84	AJ3	F	125	129	Right-handed 310
Helix 85	AJ4	F	139	141	Right-handed 310
Helix 86	AJ5	F	142	147	Right-handed alpha
Helix 87	AJ6	F	168	177	Right-handed alpha
Helix 88	AJ7	F	178	180	Right-handed 310
Helix 89	AJ8	F	229	244	Right-handed alpha
Helix 90	AJ9	F	248	260	Right-handed alpha
Helix 91	AK1	F	261	282	Right-handed alpha
Helix 92	AK2	F	299	307	Right-handed alpha
Helix 93	AK3	F	321	332	Right-handed alpha
Helix 94	AK4	F	360	368	Right-handed alpha
Helix 95	AK5	F	382	398	Right-handed alpha
Helix 96	AK6	G	17	25	Right-handed alpha
Helix 97	AK7	G	28	32	Right-handed 310
Helix 98	AK8	G	65	79	Right-handed alpha
Helix 99	AK9	G	89	99	Right-handed alpha
Helix 100	AL1	G	114	124	Right-handed alpha
Helix 101	AL2	G	125	129	Right-handed 310
Helix 102	AL3	G	168	177	Right-handed alpha
Helix 103	AL4	G	191	196	Right-handed alpha
Helix 104	AL5	G	197	202	Right-handed 310
Helix 105	AL6	G	229	244	Right-handed alpha
Helix 106	AL7	G	248	260	Right-handed alpha
Helix 107	AL8	G	261	282	Right-handed alpha
Helix 108	AL9	G	299	307	Right-handed alpha
Helix 109	AM1	G	321	332	Right-handed alpha
Helix 110	AM2	G	360	368	Right-handed alpha
Helix 111	AM3	G	382	398	Right-handed alpha
Helix 112	AM4	H	17	25	Right-handed alpha
Helix 113	AM5	H	28	32	Right-handed 310
Helix 114	AM6	H	65	80	Right-handed alpha
Helix 115	AM7	H	89	99	Right-handed alpha
Helix 116	AM8	H	114	124	Right-handed alpha
Helix 117	AM9	H	125	129	Right-handed 310
Helix 118	AN1	H	140	147	Right-handed alpha
Helix 119	AN2	H	168	177	Right-handed alpha
Helix 120	AN3	H	197	202	Right-handed 310
Helix 121	AN4	H	229	244	Right-handed alpha
Helix 122	AN5	H	248	260	Right-handed alpha
Helix 123	AN6	H	261	282	Right-handed alpha
Helix 124	AN7	H	299	307	Right-handed alpha
Helix 125	AN8	H	321	332	Right-handed alpha
Helix 126	AN9	H	360	362	Right-handed 310
Helix 127	AO1	H	363	368	Right-handed alpha
Helix 128	AO2	H	382	398	Right-handed alpha

There are 16 sheets in PDB entry 6OVG. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	83	87	first strand
Strand 2	A	223	227	anti-parallel
Strand 3	A	205	209	anti-parallel
Strand 4	A	183	187	parallel
Strand 5	A	151	157	parallel
Strand 6	A	106	110	parallel
Strand 7	A	131	135	parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	286	290	first strand
Strand 2	A	313	318	anti-parallel
Strand 3	A	373	377	anti-parallel
Strand 4	A	347	349	anti-parallel
Strand 5	A	336	337	parallel

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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	83	87	first strand
Strand 2	B	223	227	anti-parallel
Strand 3	B	205	209	anti-parallel
Strand 4	B	183	187	parallel
Strand 5	B	151	157	parallel
Strand 6	B	106	110	parallel
Strand 7	B	131	135	parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	286	290	first strand
Strand 2	B	313	318	anti-parallel
Strand 3	B	373	377	anti-parallel
Strand 4	B	347	349	anti-parallel
Strand 5	B	336	337	parallel

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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	83	87	first strand
Strand 2	C	223	227	anti-parallel
Strand 3	C	205	209	anti-parallel
Strand 4	C	183	187	parallel
Strand 5	C	151	157	parallel
Strand 6	C	106	110	parallel
Strand 7	C	131	135	parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	286	290	first strand
Strand 2	C	313	318	anti-parallel
Strand 3	C	373	377	anti-parallel
Strand 4	C	347	349	anti-parallel
Strand 5	C	336	337	parallel

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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	83	87	first strand
Strand 2	D	223	227	anti-parallel
Strand 3	D	205	209	anti-parallel
Strand 4	D	183	187	parallel
Strand 5	D	151	157	parallel
Strand 6	D	106	110	parallel
Strand 7	D	131	135	parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	286	290	first strand
Strand 2	D	313	318	anti-parallel
Strand 3	D	373	377	anti-parallel
Strand 4	D	347	349	anti-parallel
Strand 5	D	336	337	parallel

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There are 7 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	83	87	first strand
Strand 2	E	223	227	anti-parallel
Strand 3	E	205	209	anti-parallel
Strand 4	E	183	187	parallel
Strand 5	E	151	157	parallel
Strand 6	E	106	110	parallel
Strand 7	E	131	135	parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	286	290	first strand
Strand 2	E	313	318	anti-parallel
Strand 3	E	373	377	anti-parallel
Strand 4	E	347	349	anti-parallel
Strand 5	E	336	337	parallel

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There are 7 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	83	87	first strand
Strand 2	F	223	227	anti-parallel
Strand 3	F	205	209	anti-parallel
Strand 4	F	183	187	parallel
Strand 5	F	151	157	parallel
Strand 6	F	106	110	parallel
Strand 7	F	131	135	parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	286	290	first strand
Strand 2	F	313	318	anti-parallel
Strand 3	F	373	377	anti-parallel
Strand 4	F	347	349	anti-parallel
Strand 5	F	336	337	parallel

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There are 7 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	83	87	first strand
Strand 2	G	223	227	anti-parallel
Strand 3	G	205	209	anti-parallel
Strand 4	G	183	187	parallel
Strand 5	G	151	157	parallel
Strand 6	G	106	110	parallel
Strand 7	G	131	135	parallel

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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	286	290	first strand
Strand 2	G	313	318	anti-parallel
Strand 3	G	373	377	anti-parallel
Strand 4	G	347	349	anti-parallel
Strand 5	G	336	337	parallel

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There are 7 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	83	87	first strand
Strand 2	H	223	227	anti-parallel
Strand 3	H	205	209	anti-parallel
Strand 4	H	183	187	parallel
Strand 5	H	151	157	parallel
Strand 6	H	106	110	parallel
Strand 7	H	131	135	parallel

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There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	286	290	first strand
Strand 2	H	313	318	anti-parallel
Strand 3	H	373	377	anti-parallel
Strand 4	H	347	349	anti-parallel
Strand 5	H	336	337	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6OVG

Analysis of interatomic Contacts of Structural Units in PDB entry:
6OVG