Analysis of interatomic Contacts of Structural Units in PDB entry:
6OVI


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6OVI entry

There are 3 chains in PDB entry 6OVI (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TRP 14GLU 223
B
 TRP 14SER 219
C
 PHE 11SER 219
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 33 helices in PDB entry 6OVI. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
17 24Right-handed alpha
Helix 2
AA2
A
35 37Right-handed 310
Helix 3
AA3
A
38 49Right-handed alpha
Helix 4
AA4
A
62 74Right-handed alpha
Helix 5
AA5
A
86 96Right-handed alpha
Helix 6
AA6
A
107 116Right-handed alpha
Helix 7
AA7
A
127 137Right-handed alpha
Helix 8
AA8
A
151 163Right-handed alpha
Helix 9
AA9
A
178 184Right-handed alpha
Helix 10
AB1
A
198 204Right-handed alpha
Helix 11
AB2
A
206 219Right-handed alpha
Helix 12
AB3
B
17 24Right-handed alpha
Helix 13
AB4
B
35 37Right-handed 310
Helix 14
AB5
B
38 49Right-handed alpha
Helix 15
AB6
B
62 74Right-handed alpha
Helix 16
AB7
B
86 96Right-handed alpha
Helix 17
AB8
B
107 116Right-handed alpha
Helix 18
AB9
B
127 137Right-handed alpha
Helix 19
AC1
B
151 163Right-handed alpha
Helix 20
AC2
B
178 184Right-handed alpha
Helix 21
AC3
B
198 204Right-handed alpha
Helix 22
AC4
B
206 219Right-handed alpha
Helix 23
AC5
C
17 24Right-handed alpha
Helix 24
AC6
C
35 37Right-handed 310
Helix 25
AC7
C
38 49Right-handed alpha
Helix 26
AC8
C
62 74Right-handed alpha
Helix 27
AC9
C
86 96Right-handed alpha
Helix 28
AD1
C
107 116Right-handed alpha
Helix 29
AD2
C
127 137Right-handed alpha
Helix 30
AD3
C
151 163Right-handed alpha
Helix 31
AD4
C
178 184Right-handed alpha
Helix 32
AD5
C
198 204Right-handed alpha
Helix 33
AD6
C
206 219Right-handed alpha
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There are 9 sheets in PDB entry 6OVI. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
78 82first strand
Strand 2
A
53 57parallel
Strand 3
A
27 31parallel
Strand 4
A
191 193parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
101 102first strand
Strand 2
A
121 122parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
124 125first strand
Strand 2
A
141 144parallel
Strand 3
A
167 170parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
78 82first strand
Strand 2
B
53 57parallel
Strand 3
B
27 31parallel
Strand 4
B
191 193parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
101 102first strand
Strand 2
B
121 122parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
124 125first strand
Strand 2
B
141 144parallel
Strand 3
B
167 170parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
78 82first strand
Strand 2
C
53 57parallel
Strand 3
C
27 31parallel
Strand 4
C
191 193parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
101 102first strand
Strand 2
C
121 122parallel
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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
124 125first strand
Strand 2
C
141 144parallel
Strand 3
C
167 170parallel
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