Analysis of interatomic Contacts of Structural Units in PDB entry:
6OW0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6OW0 entry

There are 2 chains in PDB entry 6OW0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
MET 4ASP 326
B
MET 4GLU 328
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 34 helices in PDB entry 6OW0. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
32 46Right-handed alpha
Helix 2
AA2
A
56 59Right-handed 310
Helix 3
AA3
A
60 71Right-handed alpha
Helix 4
AA4
A
74 78Right-handed 310
Helix 5
AA5
A
98 114Right-handed alpha
Helix 6
AA6
A
131 145Right-handed alpha
Helix 7
AA7
A
157 172Right-handed alpha
Helix 8
AA8
A
187 191Right-handed 310
Helix 9
AA9
A
192 200Right-handed alpha
Helix 10
AB1
A
210 217Right-handed 310
Helix 11
AB2
A
238 247Right-handed alpha
Helix 12
AB3
A
248 257Right-handed alpha
Helix 13
AB4
A
258 265Right-handed alpha
Helix 14
AB5
A
268 279Right-handed alpha
Helix 15
AB6
A
292 300Right-handed alpha
Helix 16
AB7
A
301 303Right-handed 310
Helix 17
AB8
A
308 320Right-handed alpha
Helix 18
AB9
A
321 323Right-handed 310
Helix 19
AC1
B
32 46Right-handed alpha
Helix 20
AC2
B
60 70Right-handed alpha
Helix 21
AC3
B
74 78Right-handed 310
Helix 22
AC4
B
98 114Right-handed alpha
Helix 23
AC5
B
131 145Right-handed alpha
Helix 24
AC6
B
157 172Right-handed alpha
Helix 25
AC7
B
187 191Right-handed 310
Helix 26
AC8
B
192 200Right-handed alpha
Helix 27
AC9
B
210 214Right-handed 310
Helix 28
AD1
B
250 257Right-handed alpha
Helix 29
AD2
B
258 266Right-handed alpha
Helix 30
AD3
B
268 279Right-handed alpha
Helix 31
AD4
B
292 300Right-handed alpha
Helix 32
AD5
B
301 303Right-handed 310
Helix 33
AD6
B
308 320Right-handed alpha
Helix 34
AD7
B
321 323Right-handed 310
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There are 4 sheets in PDB entry 6OW0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
6 8first strand
Strand 2
A
15 17anti-parallel
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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
19 22first strand
Strand 2
A
50 52parallel
Strand 3
A
79 84parallel
Strand 4
A
118 124parallel
Strand 5
A
148 154parallel
Strand 6
A
175 179parallel
Strand 7
A
203 206parallel
Strand 8
A
283 288parallel
Strand 9
A
19 22parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
6 8first strand
Strand 2
B
15 17anti-parallel
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There are 9 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
19 22first strand
Strand 2
B
50 52parallel
Strand 3
B
79 84parallel
Strand 4
B
118 124parallel
Strand 5
B
148 154parallel
Strand 6
B
175 179parallel
Strand 7
B
203 206parallel
Strand 8
B
283 288parallel
Strand 9
B
19 22parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il