Analysis of interatomic Contacts of Structural Units in PDB entry:
6OWK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6OWK entry

There is 1 chain in PDB entry 6OWK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 54THR 640
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 6OWK. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
54 67Right-handed alpha
Helix 2
AA2
A
68 70Right-handed 310
Helix 3
AA3
A
76 90Right-handed alpha
Helix 4
AA4
A
95 109Right-handed alpha
Helix 5
AA5
A
113 142Right-handed alpha
Helix 6
AA6
A
149 172Right-handed alpha
Helix 7
AA7
A
181 207Right-handed alpha
Helix 8
AA8
A
209 242Right-handed alpha
Helix 9
AA9
A
246 264Right-handed alpha
Helix 10
AB1
A
264 269Right-handed alpha
Helix 11
AB2
A
270 275Right-handed 310
Helix 12
AB3
A
317 326Right-handed alpha
Helix 13
AB4
A
448 452Right-handed alpha
Helix 14
AB5
A
460 465Right-handed alpha
Helix 15
AB6
A
509 511Right-handed 310
Helix 16
AB7
A
594 598Right-handed 310
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There are 8 sheets in PDB entry 6OWK. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
283 284first strand
Strand 2
A
503 507parallel
Strand 3
A
629 639anti-parallel
Strand 4
A
554 563anti-parallel
Strand 5
A
599 602anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
519 521first strand
Strand 2
A
531 534anti-parallel
Strand 3
A
629 639anti-parallel
Strand 4
A
554 563anti-parallel
Strand 5
A
607 608anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
290 292first strand
Strand 2
A
480 489anti-parallel
Strand 3
A
467 477anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
371 376first strand
Strand 2
A
352 364anti-parallel
Strand 3
A
334 344anti-parallel
Strand 4
A
385 388anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
371 376first strand
Strand 2
A
352 364anti-parallel
Strand 3
A
438 439anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
429 435first strand
Strand 2
A
410 422anti-parallel
Strand 3
A
393 405anti-parallel
Strand 4
A
442 447anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
497 498first strand
Strand 2
A
538 547parallel
Strand 3
A
513 514anti-parallel
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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
497 498first strand
Strand 2
A
538 547parallel
Strand 3
A
613 621anti-parallel
Strand 4
A
567 573anti-parallel
Strand 5
A
577 583anti-parallel
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