Analysis of interatomic Contacts of Structural Units in PDB entry:
6OWO

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6OWO entry

Note, this PDB entry contains modified residue(s) PHOSPHOTHREONINE (TPO) . This residue is treated as heterogroup (ligand) both in the PDB entry and in LPC/CSU analysis.

There are 6 chains in PDB entry 6OWO (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ARG 11	VAL 589
B	LYS 5	PHE 581
M	ILE 2	VAL 155
M	GLY 157	CYS 435
S	MET 1	LEU 141
N	GLU 7	GLN 138

There are 90 helices in PDB entry 6OWO. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	11	22	Right-handed alpha
Helix 2	AA2	A	25	44	Right-handed alpha
Helix 3	AA3	A	51	68	Right-handed alpha
Helix 4	AA4	A	75	84	Right-handed alpha
Helix 5	AA5	A	87	101	Right-handed alpha
Helix 6	AA6	A	105	122	Right-handed alpha
Helix 7	AA7	A	124	139	Right-handed alpha
Helix 8	AA8	A	140	148	Right-handed alpha
Helix 9	AA9	A	150	157	Right-handed alpha
Helix 10	AB1	A	161	179	Right-handed alpha
Helix 11	AB2	A	180	183	Right-handed 310
Helix 12	AB3	A	188	193	Right-handed alpha
Helix 13	AB4	A	194	198	Right-handed 310
Helix 14	AB5	A	200	215	Right-handed alpha
Helix 15	AB6	A	224	238	Right-handed alpha
Helix 16	AB7	A	254	265	Right-handed alpha
Helix 17	AB8	A	266	268	Right-handed 310
Helix 18	AB9	A	273	293	Right-handed alpha
Helix 19	AC1	A	299	321	Right-handed alpha
Helix 20	AC2	A	323	335	Right-handed alpha
Helix 21	AC3	A	342	357	Right-handed alpha
Helix 22	AC4	A	362	367	Right-handed alpha
Helix 23	AC5	A	369	380	Right-handed alpha
Helix 24	AC6	A	382	396	Right-handed alpha
Helix 25	AC7	A	401	414	Right-handed alpha
Helix 26	AC8	A	420	435	Right-handed alpha
Helix 27	AC9	A	438	453	Right-handed alpha
Helix 28	AD1	A	458	472	Right-handed alpha
Helix 29	AD2	A	475	487	Right-handed alpha
Helix 30	AD3	A	493	508	Right-handed alpha
Helix 31	AD4	A	509	512	Right-handed 310
Helix 32	AD5	A	514	517	Right-handed 310
Helix 33	AD6	A	518	528	Right-handed alpha
Helix 34	AD7	A	534	552	Right-handed alpha
Helix 35	AD8	A	555	564	Right-handed alpha
Helix 36	AD9	A	565	570	Right-handed alpha
Helix 37	AE1	A	573	589	Right-handed alpha
Helix 38	AE2	B	13	23	Right-handed alpha
Helix 39	AE3	B	30	44	Right-handed alpha
Helix 40	AE4	B	47	49	Right-handed 310
Helix 41	AE5	B	50	55	Right-handed alpha
Helix 42	AE6	B	56	58	Right-handed 310
Helix 43	AE7	B	62	80	Right-handed alpha
Helix 44	AE8	B	80	85	Right-handed alpha
Helix 45	AE9	B	87	95	Right-handed alpha
Helix 46	AF1	B	100	112	Right-handed alpha
Helix 47	AF2	B	115	121	Right-handed 310
Helix 48	AF3	B	124	130	Right-handed alpha
Helix 49	AF4	B	134	151	Right-handed alpha
Helix 50	AF5	B	157	170	Right-handed alpha
Helix 51	AF6	B	173	188	Right-handed alpha
Helix 52	AF7	B	199	212	Right-handed alpha
Helix 53	AF8	B	215	227	Right-handed alpha
Helix 54	AF9	B	233	245	Right-handed alpha
Helix 55	AG1	B	246	248	Right-handed 310
Helix 56	AG2	B	252	266	Right-handed alpha
Helix 57	AG3	B	276	283	Right-handed alpha
Helix 58	AG4	B	284	290	Right-handed alpha
Helix 59	AG5	B	291	294	Right-handed 310
Helix 60	AG6	B	295	313	Right-handed alpha
Helix 61	AG7	B	331	345	Right-handed alpha
Helix 62	AG8	B	347	349	Right-handed 310
Helix 63	AG9	B	350	362	Right-handed alpha
Helix 64	AH1	B	366	384	Right-handed alpha
Helix 65	AH2	B	387	400	Right-handed alpha
Helix 66	AH3	B	403	421	Right-handed alpha
Helix 67	AH4	B	428	433	Right-handed alpha
Helix 68	AH5	B	435	439	Right-handed 310
Helix 69	AH6	B	441	454	Right-handed alpha
Helix 70	AH7	B	461	471	Right-handed alpha
Helix 71	AH8	B	477	495	Right-handed alpha
Helix 72	AH9	B	499	512	Right-handed alpha
Helix 73	AI1	B	516	533	Right-handed alpha
Helix 74	AI2	B	533	542	Right-handed alpha
Helix 75	AI3	B	556	565	Right-handed alpha
Helix 76	AI4	B	569	575	Right-handed alpha
Helix 77	AI5	B	577	581	Right-handed 310
Helix 78	AI6	M	27	36	Right-handed alpha
Helix 79	AI7	M	74	94	Right-handed alpha
Helix 80	AI8	M	97	102	Right-handed alpha
Helix 81	AI9	M	104	115	Right-handed alpha
Helix 82	AJ1	M	128	132	Right-handed 310
Helix 83	AJ2	M	414	418	Right-handed 310
Helix 84	AJ3	S	24	34	Right-handed alpha
Helix 85	AJ4	S	35	40	Right-handed alpha
Helix 86	AJ5	S	79	95	Right-handed alpha
Helix 87	AJ6	S	100	106	Right-handed alpha
Helix 88	AJ7	S	106	117	Right-handed alpha
Helix 89	AJ8	S	127	140	Right-handed alpha
Helix 90	AJ9	N	111	137	Right-handed alpha

There are 8 sheets in PDB entry 6OWO. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	14	19	first strand
Strand 2	M	4	8	anti-parallel
Strand 3	M	63	69	anti-parallel
Strand 4	M	53	60	anti-parallel
Strand 5	M	47	50	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	116	117	first strand
Strand 2	M	120	121	anti-parallel

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There are 9 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	245	248	first strand
Strand 2	M	270	279	anti-parallel
Strand 3	M	191	205	anti-parallel
Strand 4	M	172	185	anti-parallel
Strand 5	M	419	433	parallel
Strand 6	M	386	391	anti-parallel
Strand 7	M	316	325	anti-parallel
Strand 8	M	350	359	anti-parallel
Strand 9	M	341	345	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	262	265	first strand
Strand 2	M	211	216	anti-parallel
Strand 3	M	401	407	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	287	296	first strand
Strand 2	M	300	309	anti-parallel
Strand 3	M	363	372	anti-parallel
Strand 4	M	330	337	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	S	14	19	first strand
Strand 2	S	2	9	anti-parallel
Strand 3	S	65	71	anti-parallel
Strand 4	S	55	61	anti-parallel
Strand 5	S	49	52	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	S	118	119	first strand
Strand 2	S	122	123	anti-parallel

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There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	67	72	first strand
Strand 2	N	54	60	anti-parallel
Strand 3	N	42	51	anti-parallel
Strand 4	N	8	19	anti-parallel
Strand 5	N	103	107	anti-parallel
Strand 6	N	91	95	anti-parallel
Strand 7	N	81	83	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6OWO

Analysis of interatomic Contacts of Structural Units in PDB entry:
6OWO