Analysis of interatomic Contacts of Structural Units in PDB entry:
6OWU

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6OWU entry

There are 6 chains in PDB entry 6OWU (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	CYS 1	ASN 171
B	CYS 1	ASN 171
C	CYS 1	ASN 171
D	CYS 1	ASN 171
E	CYS 1	ASN 171
F	CYS 1	ASN 171

There are 18 helices in PDB entry 6OWU. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	19	21	Right-handed 310
Helix 2	AA2	A	99	105	Right-handed alpha
Helix 3	AA3	A	106	111	Right-handed alpha
Helix 4	AA4	B	19	21	Right-handed 310
Helix 5	AA5	B	99	105	Right-handed alpha
Helix 6	AA6	B	106	111	Right-handed alpha
Helix 7	AA7	C	19	21	Right-handed 310
Helix 8	AA8	C	99	105	Right-handed alpha
Helix 9	AA9	C	106	111	Right-handed alpha
Helix 10	AB1	D	19	21	Right-handed 310
Helix 11	AB2	D	99	105	Right-handed alpha
Helix 12	AB3	D	106	111	Right-handed alpha
Helix 13	AB4	E	19	21	Right-handed 310
Helix 14	AB5	E	99	105	Right-handed alpha
Helix 15	AB6	E	106	111	Right-handed alpha
Helix 16	AB7	F	19	21	Right-handed 310
Helix 17	AB8	F	99	105	Right-handed alpha
Helix 18	AB9	F	106	111	Right-handed alpha

There are 30 sheets in PDB entry 6OWU. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2	3	first strand
Strand 2	A	148	155	anti-parallel
Strand 3	A	34	45	anti-parallel
Strand 4	A	26	28	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	7	9	first strand
Strand 2	A	15	17	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	59	61	first strand
Strand 2	A	48	52	anti-parallel
Strand 3	A	138	143	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	92	98	first strand
Strand 2	A	66	72	anti-parallel
Strand 3	A	113	116	anti-parallel
Strand 4	A	135	136	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	160	162	first strand
Strand 2	A	168	170	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	2	3	first strand
Strand 2	B	148	155	anti-parallel
Strand 3	B	34	45	anti-parallel
Strand 4	B	26	28	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	7	9	first strand
Strand 2	B	15	17	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	59	61	first strand
Strand 2	B	48	52	anti-parallel
Strand 3	B	138	143	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	92	98	first strand
Strand 2	B	66	72	anti-parallel
Strand 3	B	113	116	anti-parallel
Strand 4	B	135	136	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	160	162	first strand
Strand 2	B	168	170	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	2	3	first strand
Strand 2	C	148	155	anti-parallel
Strand 3	C	34	45	anti-parallel
Strand 4	C	26	28	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	7	9	first strand
Strand 2	C	15	17	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	59	61	first strand
Strand 2	C	48	52	anti-parallel
Strand 3	C	138	143	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	92	98	first strand
Strand 2	C	66	72	anti-parallel
Strand 3	C	113	116	anti-parallel
Strand 4	C	135	136	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	160	162	first strand
Strand 2	C	168	170	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	2	3	first strand
Strand 2	D	148	155	anti-parallel
Strand 3	D	34	45	anti-parallel
Strand 4	D	26	28	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	7	9	first strand
Strand 2	D	15	17	anti-parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	59	61	first strand
Strand 2	D	48	52	anti-parallel
Strand 3	D	138	143	anti-parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	92	98	first strand
Strand 2	D	66	72	anti-parallel
Strand 3	D	113	116	anti-parallel
Strand 4	D	135	136	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	160	162	first strand
Strand 2	D	168	170	anti-parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	2	3	first strand
Strand 2	E	148	155	anti-parallel
Strand 3	E	34	45	anti-parallel
Strand 4	E	26	28	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	7	9	first strand
Strand 2	E	15	17	anti-parallel

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There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	59	61	first strand
Strand 2	E	48	52	anti-parallel
Strand 3	E	138	143	anti-parallel

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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	92	98	first strand
Strand 2	E	66	72	anti-parallel
Strand 3	E	113	116	anti-parallel
Strand 4	E	135	136	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	160	162	first strand
Strand 2	E	168	170	anti-parallel

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There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	2	3	first strand
Strand 2	F	148	155	anti-parallel
Strand 3	F	34	45	anti-parallel
Strand 4	F	26	28	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	7	9	first strand
Strand 2	F	15	17	anti-parallel

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There are 3 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	59	61	first strand
Strand 2	F	48	52	anti-parallel
Strand 3	F	138	143	anti-parallel

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There are 4 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	92	98	first strand
Strand 2	F	66	72	anti-parallel
Strand 3	F	113	116	anti-parallel
Strand 4	F	135	136	anti-parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	160	162	first strand
Strand 2	F	168	170	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6OWU

Analysis of interatomic Contacts of Structural Units in PDB entry:
6OWU