Analysis of interatomic Contacts of Structural Units in PDB entry:
6OZ5

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6OZ5 entry

There are 4 chains in PDB entry 6OZ5 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LEU 87	LYS 327
B	MET 1	LEU 793
C	GLU 6	LYS 327
D	MET 1	ARG 794

There are 82 helices in PDB entry 6OZ5. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	107	122	Right-handed alpha
Helix 2	AA2	A	136	140	Right-handed alpha
Helix 3	AA3	A	141	144	Right-handed 310
Helix 4	AA4	A	149	154	Right-handed alpha
Helix 5	AA5	A	170	181	Right-handed alpha
Helix 6	AA6	A	219	236	Right-handed alpha
Helix 7	AA7	A	276	283	Right-handed alpha
Helix 8	AA8	A	299	308	Right-handed alpha
Helix 9	AA9	A	313	318	Right-handed alpha
Helix 10	AB1	A	319	324	Right-handed alpha
Helix 11	AB2	A	325	327	Right-handed 310
Helix 12	AB3	B	5	10	Right-handed alpha
Helix 13	AB4	B	17	28	Right-handed alpha
Helix 14	AB5	B	146	151	Right-handed alpha
Helix 15	AB6	B	166	170	Right-handed 310
Helix 16	AB7	B	171	184	Right-handed alpha
Helix 17	AB8	B	231	240	Right-handed alpha
Helix 18	AB9	B	247	261	Right-handed alpha
Helix 19	AC1	B	270	272	Right-handed 310
Helix 20	AC2	B	339	344	Right-handed alpha
Helix 21	AC3	B	345	350	Right-handed alpha
Helix 22	AC4	B	354	361	Right-handed alpha
Helix 23	AC5	B	368	385	Right-handed alpha
Helix 24	AC6	B	410	418	Right-handed alpha
Helix 25	AC7	B	422	433	Right-handed alpha
Helix 26	AC8	B	457	470	Right-handed alpha
Helix 27	AC9	B	471	474	Right-handed 310
Helix 28	AD1	B	494	504	Right-handed alpha
Helix 29	AD2	B	517	525	Right-handed alpha
Helix 30	AD3	B	538	542	Right-handed 310
Helix 31	AD4	B	548	561	Right-handed alpha
Helix 32	AD5	B	582	584	Right-handed 310
Helix 33	AD6	B	613	627	Right-handed alpha
Helix 34	AD7	B	628	629	Right-handed 310
Helix 35	AD8	B	630	632	Right-handed 310
Helix 36	AD9	B	666	673	Right-handed alpha
Helix 37	AE1	B	687	690	Right-handed 310
Helix 38	AE2	B	719	731	Right-handed alpha
Helix 39	AE3	B	770	788	Right-handed alpha
Helix 40	AE4	C	9	19	Right-handed alpha
Helix 41	AE5	C	26	44	Right-handed alpha
Helix 42	AE6	C	49	51	Right-handed 310
Helix 43	AE7	C	52	90	Right-handed alpha
Helix 44	AE8	C	107	122	Right-handed alpha
Helix 45	AE9	C	135	140	Right-handed alpha
Helix 46	AF1	C	141	144	Right-handed 310
Helix 47	AF2	C	150	155	Right-handed alpha
Helix 48	AF3	C	170	180	Right-handed alpha
Helix 49	AF4	C	219	236	Right-handed alpha
Helix 50	AF5	C	276	283	Right-handed alpha
Helix 51	AF6	C	299	308	Right-handed alpha
Helix 52	AF7	C	311	316	Right-handed 310
Helix 53	AF8	C	319	324	Right-handed alpha
Helix 54	AF9	C	325	327	Right-handed 310
Helix 55	AG1	D	5	10	Right-handed alpha
Helix 56	AG2	D	17	27	Right-handed alpha
Helix 57	AG3	D	146	151	Right-handed alpha
Helix 58	AG4	D	171	183	Right-handed alpha
Helix 59	AG5	D	231	240	Right-handed alpha
Helix 60	AG6	D	247	261	Right-handed alpha
Helix 61	AG7	D	270	272	Right-handed 310
Helix 62	AG8	D	339	344	Right-handed alpha
Helix 63	AG9	D	345	350	Right-handed alpha
Helix 64	AH1	D	354	363	Right-handed alpha
Helix 65	AH2	D	368	385	Right-handed alpha
Helix 66	AH3	D	410	418	Right-handed alpha
Helix 67	AH4	D	422	433	Right-handed alpha
Helix 68	AH5	D	457	470	Right-handed alpha
Helix 69	AH6	D	471	474	Right-handed 310
Helix 70	AH7	D	494	504	Right-handed alpha
Helix 71	AH8	D	517	525	Right-handed alpha
Helix 72	AH9	D	538	542	Right-handed 310
Helix 73	AI1	D	548	561	Right-handed alpha
Helix 74	AI2	D	582	584	Right-handed 310
Helix 75	AI3	D	613	627	Right-handed alpha
Helix 76	AI4	D	628	629	Right-handed 310
Helix 77	AI5	D	630	632	Right-handed 310
Helix 78	AI6	D	666	672	Right-handed alpha
Helix 79	AI7	D	673	675	Right-handed 310
Helix 80	AI8	D	687	689	Right-handed 310
Helix 81	AI9	D	719	731	Right-handed alpha
Helix 82	AJ1	D	770	790	Right-handed alpha

There are 29 sheets in PDB entry 6OZ5. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	126	127	first strand
Strand 2	A	185	194	parallel
Strand 3	A	205	215	anti-parallel
Strand 4	A	291	298	anti-parallel
Strand 5	A	266	275	anti-parallel
Strand 6	A	251	260	anti-parallel
Strand 7	A	241	248	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	133	135	first strand
Strand 2	A	164	166	anti-parallel
Strand 3	A	158	159	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	2	4	first strand
Strand 2	B	156	160	anti-parallel
Strand 3	B	32	37	anti-parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	75	79	first strand
Strand 2	B	63	68	anti-parallel
Strand 3	B	43	55	anti-parallel
Strand 4	B	89	99	anti-parallel
Strand 5	B	103	104	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	75	79	first strand
Strand 2	B	63	68	anti-parallel
Strand 3	B	43	55	anti-parallel
Strand 4	B	89	99	anti-parallel
Strand 5	B	118	119	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	108	110	first strand
Strand 2	B	113	115	anti-parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	205	207	first strand
Strand 2	B	276	280	parallel
Strand 3	B	302	305	anti-parallel
Strand 4	B	310	313	anti-parallel
Strand 5	B	317	318	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	265	268	first strand
Strand 2	B	330	337	anti-parallel
Strand 3	B	215	222	anti-parallel
Strand 4	B	387	388	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	265	268	first strand
Strand 2	B	330	337	anti-parallel
Strand 3	B	215	222	anti-parallel
Strand 4	B	392	395	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	285	288	first strand
Strand 2	B	294	297	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	405	409	first strand
Strand 2	B	443	447	anti-parallel
Strand 3	B	436	440	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	479	482	first strand
Strand 2	D	480	483	anti-parallel

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There are 7 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	508	509	first strand
Strand 2	B	568	578	parallel
Strand 3	B	586	597	anti-parallel
Strand 4	B	679	685	anti-parallel
Strand 5	B	657	665	anti-parallel
Strand 6	B	644	654	anti-parallel
Strand 7	B	634	638	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	515	516	first strand
Strand 2	B	543	544	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	706	715	first strand
Strand 2	B	753	762	anti-parallel
Strand 3	B	735	744	anti-parallel

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There are 7 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	126	127	first strand
Strand 2	C	185	194	parallel
Strand 3	C	205	215	anti-parallel
Strand 4	C	291	298	anti-parallel
Strand 5	C	266	275	anti-parallel
Strand 6	C	251	260	anti-parallel
Strand 7	C	241	245	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	133	134	first strand
Strand 2	C	165	166	anti-parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	2	4	first strand
Strand 2	D	156	161	anti-parallel
Strand 3	D	31	37	anti-parallel

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There are 5 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	75	79	first strand
Strand 2	D	63	68	anti-parallel
Strand 3	D	43	55	anti-parallel
Strand 4	D	89	99	anti-parallel
Strand 5	D	103	104	anti-parallel

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There are 5 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	75	79	first strand
Strand 2	D	63	68	anti-parallel
Strand 3	D	43	55	anti-parallel
Strand 4	D	89	99	anti-parallel
Strand 5	D	117	119	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	108	110	first strand
Strand 2	D	113	115	anti-parallel

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There are 5 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	205	207	first strand
Strand 2	D	276	280	parallel
Strand 3	D	302	305	anti-parallel
Strand 4	D	310	313	anti-parallel
Strand 5	D	317	318	anti-parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	265	268	first strand
Strand 2	D	331	337	anti-parallel
Strand 3	D	215	222	anti-parallel
Strand 4	D	387	388	anti-parallel

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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	265	268	first strand
Strand 2	D	331	337	anti-parallel
Strand 3	D	215	222	anti-parallel
Strand 4	D	392	395	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	286	288	first strand
Strand 2	D	294	296	anti-parallel

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There are 3 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	405	409	first strand
Strand 2	D	443	447	anti-parallel
Strand 3	D	436	439	anti-parallel

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There are 7 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	508	509	first strand
Strand 2	D	567	578	parallel
Strand 3	D	586	597	anti-parallel
Strand 4	D	679	685	anti-parallel
Strand 5	D	657	665	anti-parallel
Strand 6	D	644	654	anti-parallel
Strand 7	D	634	638	anti-parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	515	516	first strand
Strand 2	D	543	544	anti-parallel

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There are 4 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	735	744	first strand
Strand 2	D	753	762	anti-parallel
Strand 3	D	706	715	anti-parallel
Strand 4	D	792	794	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6OZ5

Analysis of interatomic Contacts of Structural Units in PDB entry:
6OZ5