Analysis of interatomic Contacts of Structural Units in PDB entry:
6OZ6

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6OZ6 entry

There are 8 chains in PDB entry 6OZ6 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
E	ASP 1	SER 126
A	ALA 15	LEU 358
F	ASP 1	SER 126
B	TYR 12	LYS 357
G	ASP 1	SER 126
C	ASP 11	LEU 358
H	GLN 3	SER 126
D	PHE 24	LEU 358

There are 67 helices in PDB entry 6OZ6. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	E	28	30	Right-handed 310
Helix 2	AA2	E	86	90	Right-handed 310
Helix 3	AA3	E	109	113	Right-handed 310
Helix 4	AA4	A	16	23	Right-handed alpha
Helix 5	AA5	A	24	56	Right-handed alpha
Helix 6	AA6	A	77	93	Right-handed alpha
Helix 7	AA7	A	98	124	Right-handed alpha
Helix 8	AA8	A	129	150	Right-handed alpha
Helix 9	AA9	A	173	193	Right-handed alpha
Helix 10	AB1	A	199	217	Right-handed alpha
Helix 11	AB2	A	219	227	Right-handed alpha
Helix 12	AB3	A	235	256	Right-handed alpha
Helix 13	AB4	A	263	282	Right-handed alpha
Helix 14	AB5	A	284	292	Right-handed alpha
Helix 15	AB6	A	292	313	Right-handed alpha
Helix 16	AB7	A	322	330	Right-handed alpha
Helix 17	AB8	A	333	355	Right-handed alpha
Helix 18	AB9	F	28	30	Right-handed 310
Helix 19	AC1	F	86	90	Right-handed 310
Helix 20	AC2	F	109	113	Right-handed 310
Helix 21	AC3	B	13	21	Right-handed alpha
Helix 22	AC4	B	24	52	Right-handed alpha
Helix 23	AC5	B	77	93	Right-handed alpha
Helix 24	AC6	B	98	124	Right-handed alpha
Helix 25	AC7	B	130	150	Right-handed alpha
Helix 26	AC8	B	173	193	Right-handed alpha
Helix 27	AC9	B	199	217	Right-handed alpha
Helix 28	AD1	B	219	227	Right-handed alpha
Helix 29	AD2	B	235	256	Right-handed alpha
Helix 30	AD3	B	263	282	Right-handed alpha
Helix 31	AD4	B	284	292	Right-handed alpha
Helix 32	AD5	B	292	312	Right-handed alpha
Helix 33	AD6	B	322	330	Right-handed alpha
Helix 34	AD7	B	333	355	Right-handed alpha
Helix 35	AD8	G	28	30	Right-handed 310
Helix 36	AD9	G	86	90	Right-handed 310
Helix 37	AE1	G	109	113	Right-handed 310
Helix 38	AE2	C	18	22	Right-handed 310
Helix 39	AE3	C	24	52	Right-handed alpha
Helix 40	AE4	C	77	93	Right-handed alpha
Helix 41	AE5	C	98	123	Right-handed alpha
Helix 42	AE6	C	132	150	Right-handed alpha
Helix 43	AE7	C	173	193	Right-handed alpha
Helix 44	AE8	C	199	217	Right-handed alpha
Helix 45	AE9	C	219	226	Right-handed alpha
Helix 46	AF1	C	235	256	Right-handed alpha
Helix 47	AF2	C	263	282	Right-handed alpha
Helix 48	AF3	C	284	292	Right-handed alpha
Helix 49	AF4	C	292	313	Right-handed alpha
Helix 50	AF5	C	322	330	Right-handed alpha
Helix 51	AF6	C	333	355	Right-handed alpha
Helix 52	AF7	H	28	30	Right-handed 310
Helix 53	AF8	H	86	90	Right-handed 310
Helix 54	AF9	H	109	113	Right-handed 310
Helix 55	AG1	D	25	51	Right-handed alpha
Helix 56	AG2	D	78	93	Right-handed alpha
Helix 57	AG3	D	98	124	Right-handed alpha
Helix 58	AG4	D	129	150	Right-handed alpha
Helix 59	AG5	D	173	193	Right-handed alpha
Helix 60	AG6	D	199	217	Right-handed alpha
Helix 61	AG7	D	219	227	Right-handed alpha
Helix 62	AG8	D	236	256	Right-handed alpha
Helix 63	AG9	D	268	282	Right-handed alpha
Helix 64	AH1	D	284	292	Right-handed alpha
Helix 65	AH2	D	292	311	Right-handed alpha
Helix 66	AH3	D	324	330	Right-handed alpha
Helix 67	AH4	D	333	355	Right-handed alpha

There are 16 sheets in PDB entry 6OZ6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	4	7	first strand
Strand 2	E	18	24	anti-parallel
Strand 3	E	77	82	anti-parallel
Strand 4	E	67	72	anti-parallel

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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	10	13	first strand
Strand 2	E	120	125	parallel
Strand 3	E	91	99	anti-parallel
Strand 4	E	32	39	anti-parallel
Strand 5	E	46	51	anti-parallel
Strand 6	E	57	59	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	10	13	first strand
Strand 2	E	120	125	parallel
Strand 3	E	91	99	anti-parallel
Strand 4	E	115	116	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	157	159	first strand
Strand 2	A	167	169	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	4	7	first strand
Strand 2	F	18	24	anti-parallel
Strand 3	F	77	82	anti-parallel
Strand 4	F	67	72	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	10	13	first strand
Strand 2	F	120	125	parallel
Strand 3	F	91	99	anti-parallel
Strand 4	F	32	39	anti-parallel
Strand 5	F	46	51	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	10	13	first strand
Strand 2	F	120	125	parallel
Strand 3	F	91	99	anti-parallel
Strand 4	F	115	116	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	157	159	first strand
Strand 2	B	167	169	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	4	7	first strand
Strand 2	G	18	24	anti-parallel
Strand 3	G	77	82	anti-parallel
Strand 4	G	67	72	anti-parallel

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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	10	12	first strand
Strand 2	G	120	124	parallel
Strand 3	G	91	99	anti-parallel
Strand 4	G	32	39	anti-parallel
Strand 5	G	46	51	anti-parallel
Strand 6	G	57	59	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	10	12	first strand
Strand 2	G	120	124	parallel
Strand 3	G	91	99	anti-parallel
Strand 4	G	115	116	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	157	159	first strand
Strand 2	C	167	169	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	4	7	first strand
Strand 2	H	18	24	anti-parallel
Strand 3	H	77	82	anti-parallel
Strand 4	H	67	72	anti-parallel

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There are 6 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	10	13	first strand
Strand 2	H	120	125	parallel
Strand 3	H	91	99	anti-parallel
Strand 4	H	32	39	anti-parallel
Strand 5	H	46	51	anti-parallel
Strand 6	H	57	59	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	10	13	first strand
Strand 2	H	120	125	parallel
Strand 3	H	91	99	anti-parallel
Strand 4	H	115	116	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	157	159	first strand
Strand 2	D	167	169	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6OZ6

Analysis of interatomic Contacts of Structural Units in PDB entry:
6OZ6