Analysis of interatomic Contacts of Structural Units in PDB entry:
6OZW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6OZW entry

There is 1 chain in PDB entry 6OZW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 19GLU 574
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 22 helices in PDB entry 6OZW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
28 40Right-handed alpha
Helix 2
AA2
A
78 92Right-handed alpha
Helix 3
AA3
A
102 116Right-handed alpha
Helix 4
AA4
A
132 142Right-handed alpha
Helix 5
AA5
A
147 176Right-handed alpha
Helix 6
AA6
A
183 203Right-handed alpha
Helix 7
AA7
A
238 249Right-handed alpha
Helix 8
AA8
A
273 286Right-handed alpha
Helix 9
AA9
A
288 302Right-handed alpha
Helix 10
AB1
A
306 308Right-handed 310
Helix 11
AB2
A
325 340Right-handed alpha
Helix 12
AB3
A
341 345Right-handed 310
Helix 13
AB4
A
372 377Right-handed alpha
Helix 14
AB5
A
378 380Right-handed 310
Helix 15
AB6
A
381 398Right-handed alpha
Helix 16
AB7
A
429 435Right-handed 310
Helix 17
AB8
A
472 483Right-handed alpha
Helix 18
AB9
A
490 501Right-handed alpha
Helix 19
AC1
A
514 528Right-handed alpha
Helix 20
AC2
A
529 532Right-handed 310
Helix 21
AC3
A
533 549Right-handed alpha
Helix 22
AC4
A
553 574Right-handed alpha
Back to top of page

There are 6 sheets in PDB entry 6OZW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
43 47first strand
Strand 2
A
22 26parallel
Strand 3
A
94 97parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
53 55first strand
Strand 2
A
72 74anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
62 63first strand
Strand 2
A
69 70anti-parallel
Back to list of sheets
Back to top of page

There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
207 217first strand
Strand 2
A
220 229anti-parallel
Strand 3
A
417 428anti-parallel
Strand 4
A
403 414anti-parallel
Strand 5
A
253 266anti-parallel
Strand 6
A
452 464anti-parallel
Strand 7
A
207 217anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
303 304first strand
Strand 2
A
310 311anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
504 507first strand
Strand 2
A
510 513anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il