Analysis of interatomic Contacts of Structural Units in PDB entry:
6P07


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6P07 entry

There are 7 chains in PDB entry 6P07 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 460GLN 751
B
 VAL 455THR 757
C
 VAL 456ILE 756
D
 VAL 455THR 757
E
 VAL 455THR 757
F
 VAL 456ASP 755
G
 GLU 1GLU 15
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 95 helices in PDB entry 6P07. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
463 472Right-handed alpha
Helix 2
AA2
A
481 485Right-handed 310
Helix 3
AA3
A
488 499Right-handed alpha
Helix 4
AA4
A
528 541Right-handed alpha
Helix 5
AA5
A
548 553Right-handed alpha
Helix 6
AA6
A
559 574Right-handed alpha
Helix 7
AA7
A
596 612Right-handed alpha
Helix 8
AA8
A
630 634Right-handed 310
Helix 9
AA9
A
635 640Right-handed alpha
Helix 10
AB1
A
652 665Right-handed alpha
Helix 11
AB2
A
672 683Right-handed alpha
Helix 12
AB3
A
687 700Right-handed alpha
Helix 13
AB4
A
701 706Right-handed 310
Helix 14
AB5
A
708 713Right-handed alpha
Helix 15
AB6
A
723 730Right-handed alpha
Helix 16
AB7
A
731 733Right-handed 310
Helix 17
AB8
A
739 750Right-handed alpha
Helix 18
AB9
B
462 472Right-handed alpha
Helix 19
AC1
B
488 499Right-handed alpha
Helix 20
AC2
B
499 505Right-handed alpha
Helix 21
AC3
B
529 539Right-handed alpha
Helix 22
AC4
B
548 552Right-handed 310
Helix 23
AC5
B
558 574Right-handed alpha
Helix 24
AC6
B
596 612Right-handed alpha
Helix 25
AC7
B
630 634Right-handed 310
Helix 26
AC8
B
635 642Right-handed alpha
Helix 27
AC9
B
652 668Right-handed alpha
Helix 28
AD1
B
672 683Right-handed alpha
Helix 29
AD2
B
687 705Right-handed alpha
Helix 30
AD3
B
708 712Right-handed 310
Helix 31
AD4
B
723 732Right-handed alpha
Helix 32
AD5
B
739 753Right-handed alpha
Helix 33
AD6
C
462 472Right-handed alpha
Helix 34
AD7
C
488 499Right-handed alpha
Helix 35
AD8
C
500 505Right-handed alpha
Helix 36
AD9
C
529 540Right-handed alpha
Helix 37
AE1
C
561 574Right-handed alpha
Helix 38
AE2
C
596 611Right-handed alpha
Helix 39
AE3
C
630 634Right-handed 310
Helix 40
AE4
C
635 640Right-handed alpha
Helix 41
AE5
C
652 664Right-handed alpha
Helix 42
AE6
C
672 683Right-handed alpha
Helix 43
AE7
C
687 705Right-handed alpha
Helix 44
AE8
C
723 732Right-handed alpha
Helix 45
AE9
C
742 747Right-handed alpha
Helix 46
AF1
C
748 754Right-handed alpha
Helix 47
AF2
D
462 471Right-handed alpha
Helix 48
AF3
D
481 485Right-handed 310
Helix 49
AF4
D
488 499Right-handed alpha
Helix 50
AF5
D
499 505Right-handed alpha
Helix 51
AF6
D
529 538Right-handed alpha
Helix 52
AF7
D
559 574Right-handed alpha
Helix 53
AF8
D
596 611Right-handed alpha
Helix 54
AF9
D
616 620Right-handed 310
Helix 55
AG1
D
630 634Right-handed 310
Helix 56
AG2
D
635 642Right-handed alpha
Helix 57
AG3
D
652 666Right-handed alpha
Helix 58
AG4
D
672 683Right-handed alpha
Helix 59
AG5
D
687 705Right-handed alpha
Helix 60
AG6
D
723 731Right-handed alpha
Helix 61
AG7
D
739 751Right-handed alpha
Helix 62
AG8
E
462 472Right-handed alpha
Helix 63
AG9
E
481 485Right-handed 310
Helix 64
AH1
E
488 499Right-handed alpha
Helix 65
AH2
E
500 504Right-handed 310
Helix 66
AH3
E
510 514Right-handed 310
Helix 67
AH4
E
529 539Right-handed alpha
Helix 68
AH5
E
560 574Right-handed alpha
Helix 69
AH6
E
584 587Right-handed 310
Helix 70
AH7
E
596 611Right-handed alpha
Helix 71
AH8
E
616 620Right-handed 310
Helix 72
AH9
E
630 634Right-handed 310
Helix 73
AI1
E
635 641Right-handed alpha
Helix 74
AI2
E
652 664Right-handed alpha
Helix 75
AI3
E
673 683Right-handed alpha
Helix 76
AI4
E
687 701Right-handed alpha
Helix 77
AI5
E
702 706Right-handed 310
Helix 78
AI6
E
708 712Right-handed 310
Helix 79
AI7
E
723 732Right-handed alpha
Helix 80
AI8
E
739 741Right-handed 310
Helix 81
AI9
E
742 754Right-handed alpha
Helix 82
AJ1
F
462 472Right-handed alpha
Helix 83
AJ2
F
481 485Right-handed 310
Helix 84
AJ3
F
488 499Right-handed alpha
Helix 85
AJ4
F
530 540Right-handed alpha
Helix 86
AJ5
F
559 574Right-handed alpha
Helix 87
AJ6
F
583 588Right-handed alpha
Helix 88
AJ7
F
596 612Right-handed alpha
Helix 89
AJ8
F
635 642Right-handed alpha
Helix 90
AJ9
F
652 665Right-handed alpha
Helix 91
AK1
F
666 668Right-handed 310
Helix 92
AK2
F
672 675Right-handed 310
Helix 93
AK3
F
676 683Right-handed alpha
Helix 94
AK4
F
689 707Right-handed alpha
Helix 95
AK5
F
739 753Right-handed alpha
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There are 9 sheets in PDB entry 6P07. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
624 625first strand
Strand 2
A
518 522parallel
Strand 3
A
644 647parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
545 546first strand
Strand 2
A
580 581parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
543 547first strand
Strand 2
B
577 582parallel
Strand 3
B
624 627parallel
Strand 4
B
518 522parallel
Strand 5
B
644 647parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
520 522first strand
Strand 2
C
645 647parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
543 547first strand
Strand 2
C
577 582parallel
Strand 3
C
622 627parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
473 474first strand
Strand 2
D
543 547anti-parallel
Strand 3
D
577 582parallel
Strand 4
D
622 627parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
519 522first strand
Strand 2
D
644 647parallel
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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
543 547first strand
Strand 2
E
577 582parallel
Strand 3
E
624 628parallel
Strand 4
E
519 522parallel
Strand 5
E
644 647parallel
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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
544 547first strand
Strand 2
F
578 581parallel
Strand 3
F
623 628parallel
Strand 4
F
519 522parallel
Strand 5
F
644 647parallel
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