Analysis of interatomic Contacts of Structural Units in PDB entry:
6P0X


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6P0X entry

There are 6 chains in PDB entry 6P0X (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 34GLY 172
A
 THR 174SER 234
A
 VAL 236GLU 353
B
 GLY 34GLY 172
B
 THR 174SER 234
B
 VAL 236GLU 353
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 8 helices in PDB entry 6P0X. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
174 176Right-handed 310
Helix 2
AA2
A
219 223Right-handed 310
Helix 3
AA3
A
247 251Right-handed 310
Helix 4
AA4
A
317 322Right-handed alpha
Helix 5
AA5
B
174 176Right-handed 310
Helix 6
AA6
B
219 223Right-handed 310
Helix 7
AA7
B
247 251Right-handed 310
Helix 8
AA8
B
317 322Right-handed alpha
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There are 7 sheets in PDB entry 6P0X. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
38 41first strand
Strand 2
A
55 58anti-parallel
Strand 3
A
71 72anti-parallel
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There are 11 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
95 96first strand
Strand 2
A
77 80anti-parallel
Strand 3
A
184 197anti-parallel
Strand 4
A
203 210anti-parallel
Strand 5
A
231 240anti-parallel
Strand 6
A
259 266anti-parallel
Strand 7
A
310 315anti-parallel
Strand 8
A
326 336anti-parallel
Strand 9
A
343 350anti-parallel
Strand 10
B
293 295anti-parallel
Strand 11
B
302 304anti-parallel
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There are 9 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
178 181first strand
Strand 2
A
184 197anti-parallel
Strand 3
A
168 171anti-parallel
Strand 4
A
157 162anti-parallel
Strand 5
A
145 151anti-parallel
Strand 6
A
124 137anti-parallel
Strand 7
A
116 121anti-parallel
Strand 8
A
124 137anti-parallel
Strand 9
A
103 105anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
293 295first strand
Strand 2
A
302 304anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
38 41first strand
Strand 2
B
55 58anti-parallel
Strand 3
B
71 72anti-parallel
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There are 9 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
95 96first strand
Strand 2
B
77 80anti-parallel
Strand 3
B
184 197anti-parallel
Strand 4
B
203 210anti-parallel
Strand 5
B
231 240anti-parallel
Strand 6
B
259 266anti-parallel
Strand 7
B
310 315anti-parallel
Strand 8
B
326 336anti-parallel
Strand 9
B
343 351anti-parallel
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There are 9 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
178 181first strand
Strand 2
B
184 197anti-parallel
Strand 3
B
168 171anti-parallel
Strand 4
B
157 162anti-parallel
Strand 5
B
145 151anti-parallel
Strand 6
B
124 137anti-parallel
Strand 7
B
116 121anti-parallel
Strand 8
B
124 137anti-parallel
Strand 9
B
103 105anti-parallel
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