Analysis of interatomic Contacts of Structural Units in PDB entry:
6P2M


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6P2M entry

There is 1 chain in PDB entry 6P2M (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 31THR 726
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 4 helices in PDB entry 6P2M. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
96 100Right-handed 310
Helix 2
AA2
A
211 214Right-handed 310
Helix 3
AA3
A
365 371Right-handed 310
Helix 4
AA4
A
597 602Right-handed 310
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There are 14 sheets in PDB entry 6P2M. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
40 44first strand
Strand 2
A
718 723anti-parallel
Strand 3
A
709 713anti-parallel
Strand 4
A
696 701anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
53 58first strand
Strand 2
A
66 70anti-parallel
Strand 3
A
75 79anti-parallel
Strand 4
A
84 87anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
102 108first strand
Strand 2
A
111 119anti-parallel
Strand 3
A
131 135anti-parallel
Strand 4
A
143 146anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
164 166first strand
Strand 2
A
174 177anti-parallel
Strand 3
A
183 186anti-parallel
Strand 4
A
194 195anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
204 209first strand
Strand 2
A
223 227anti-parallel
Strand 3
A
235 238anti-parallel
Strand 4
A
246 247anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
256 263first strand
Strand 2
A
266 272anti-parallel
Strand 3
A
283 289anti-parallel
Strand 4
A
295 297anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
306 313first strand
Strand 2
A
316 325anti-parallel
Strand 3
A
334 337anti-parallel
Strand 4
A
345 346anti-parallel
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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
359 361first strand
Strand 2
A
409 412parallel
Strand 3
A
396 400anti-parallel
Strand 4
A
389 393anti-parallel
Strand 5
A
379 381anti-parallel
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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
422 426first strand
Strand 2
A
434 438anti-parallel
Strand 3
A
442 446anti-parallel
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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
464 470first strand
Strand 2
A
473 481anti-parallel
Strand 3
A
487 490anti-parallel
Strand 4
A
498 499anti-parallel
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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
515 517first strand
Strand 2
A
524 526anti-parallel
Strand 3
A
534 536anti-parallel
Strand 4
A
544 545anti-parallel
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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
556 558first strand
Strand 2
A
566 570anti-parallel
Strand 3
A
575 579anti-parallel
Strand 4
A
587 588anti-parallel
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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
604 608first strand
Strand 2
A
616 620anti-parallel
Strand 3
A
625 628anti-parallel
Strand 4
A
636 637anti-parallel
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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
643 650first strand
Strand 2
A
660 667anti-parallel
Strand 3
A
670 676anti-parallel
Strand 4
A
684 685anti-parallel
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