Analysis of interatomic Contacts of Structural Units in PDB entry:
6P3C


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6P3C entry

There are 2 chains in PDB entry 6P3C (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLY 461
B
 THR 3GLY 461
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 41 helices in PDB entry 6P3C. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
23 33Right-handed alpha
Helix 2
AA2
A
41 62Right-handed alpha
Helix 3
AA3
A
66 82Right-handed alpha
Helix 4
AA4
A
85 89Right-handed 310
Helix 5
AA5
A
99 118Right-handed alpha
Helix 6
AA6
A
139 159Right-handed alpha
Helix 7
AA7
A
159 178Right-handed alpha
Helix 8
AA8
A
197 223Right-handed alpha
Helix 9
AA9
A
241 255Right-handed alpha
Helix 10
AB1
A
263 270Right-handed alpha
Helix 11
AB2
A
271 299Right-handed alpha
Helix 12
AB3
A
327 353Right-handed alpha
Helix 13
AB4
A
361 387Right-handed alpha
Helix 14
AB5
A
388 391Right-handed 310
Helix 15
AB6
A
394 405Right-handed alpha
Helix 16
AB7
A
408 411Right-handed 310
Helix 17
AB8
A
412 417Right-handed alpha
Helix 18
AB9
A
417 432Right-handed alpha
Helix 19
AC1
A
434 443Right-handed alpha
Helix 20
AC2
A
446 454Right-handed alpha
Helix 21
AC3
A
455 459Right-handed 310
Helix 22
AC4
B
23 33Right-handed alpha
Helix 23
AC5
B
41 62Right-handed alpha
Helix 24
AC6
B
66 82Right-handed alpha
Helix 25
AC7
B
85 89Right-handed 310
Helix 26
AC8
B
99 118Right-handed alpha
Helix 27
AC9
B
139 159Right-handed alpha
Helix 28
AD1
B
159 178Right-handed alpha
Helix 29
AD2
B
197 223Right-handed alpha
Helix 30
AD3
B
241 255Right-handed alpha
Helix 31
AD4
B
263 270Right-handed alpha
Helix 32
AD5
B
271 299Right-handed alpha
Helix 33
AD6
B
327 352Right-handed alpha
Helix 34
AD7
B
361 387Right-handed alpha
Helix 35
AD8
B
388 391Right-handed 310
Helix 36
AD9
B
394 405Right-handed alpha
Helix 37
AE1
B
406 413Right-handed 310
Helix 38
AE2
B
417 432Right-handed alpha
Helix 39
AE3
B
434 442Right-handed alpha
Helix 40
AE4
B
446 454Right-handed alpha
Helix 41
AE5
B
455 459Right-handed 310
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There are 8 sheets in PDB entry 6P3C. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
4 9first strand
Strand 2
A
12 17anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
182 187first strand
Strand 2
A
190 196anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
224 225first strand
Strand 2
A
259 260parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
309 310first strand
Strand 2
A
392 393anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
4 9first strand
Strand 2
B
12 17anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
182 187first strand
Strand 2
B
190 196anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
224 225first strand
Strand 2
B
259 260parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
309 310first strand
Strand 2
B
392 393anti-parallel
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