Analysis of interatomic Contacts of Structural Units in PDB entry:
6P3H

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6P3H entry

There are 4 chains in PDB entry 6P3H (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 8	LEU 358
D	MET 8	LEU 358
C	ASN 7	LEU 358
B	MET 8	SER 291

There are 42 helices in PDB entry 6P3H. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	29	31	Right-handed 310
Helix 2	AA2	A	34	47	Right-handed alpha
Helix 3	AA3	A	61	64	Right-handed 310
Helix 4	AA4	A	100	114	Right-handed alpha
Helix 5	AA5	A	144	147	Right-handed 310
Helix 6	AA6	A	211	214	Right-handed 310
Helix 7	AA7	A	220	226	Right-handed alpha
Helix 8	AA8	A	227	242	Right-handed alpha
Helix 9	AA9	A	285	296	Right-handed alpha
Helix 10	AB1	A	301	307	Right-handed alpha
Helix 11	AB2	D	29	31	Right-handed 310
Helix 12	AB3	D	34	47	Right-handed alpha
Helix 13	AB4	D	61	64	Right-handed 310
Helix 14	AB5	D	100	114	Right-handed alpha
Helix 15	AB6	D	144	147	Right-handed 310
Helix 16	AB7	D	211	214	Right-handed 310
Helix 17	AB8	D	220	226	Right-handed alpha
Helix 18	AB9	D	227	242	Right-handed alpha
Helix 19	AC1	D	243	246	Right-handed 310
Helix 20	AC2	D	285	297	Right-handed alpha
Helix 21	AC3	D	301	307	Right-handed alpha
Helix 22	AC4	C	29	31	Right-handed 310
Helix 23	AC5	C	34	47	Right-handed alpha
Helix 24	AC6	C	61	64	Right-handed 310
Helix 25	AC7	C	100	114	Right-handed alpha
Helix 26	AC8	C	144	147	Right-handed 310
Helix 27	AC9	C	211	214	Right-handed 310
Helix 28	AD1	C	220	226	Right-handed alpha
Helix 29	AD2	C	227	242	Right-handed alpha
Helix 30	AD3	C	285	296	Right-handed alpha
Helix 31	AD4	C	301	307	Right-handed alpha
Helix 32	AD5	B	29	31	Right-handed 310
Helix 33	AD6	B	34	47	Right-handed alpha
Helix 34	AD7	B	61	64	Right-handed 310
Helix 35	AD8	B	100	114	Right-handed alpha
Helix 36	AD9	B	144	147	Right-handed 310
Helix 37	AE1	B	211	214	Right-handed 310
Helix 38	AE2	B	220	226	Right-handed alpha
Helix 39	AE3	B	227	242	Right-handed alpha
Helix 40	AE4	B	243	246	Right-handed 310
Helix 41	AE5	B	285	296	Right-handed alpha
Helix 42	AE6	B	301	307	Right-handed alpha

There are 4 sheets in PDB entry 6P3H. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 12 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	94	95	first strand
Strand 2	A	80	87	anti-parallel
Strand 3	A	66	72	anti-parallel
Strand 4	A	21	27	parallel
Strand 5	A	10	18	anti-parallel
Strand 6	A	347	356	anti-parallel
Strand 7	C	347	356	anti-parallel
Strand 8	C	10	18	anti-parallel
Strand 9	C	21	27	anti-parallel
Strand 10	C	66	72	parallel
Strand 11	C	80	87	anti-parallel
Strand 12	C	94	95	anti-parallel

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There are 32 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	189	191	first strand
Strand 2	A	194	200	anti-parallel
Strand 3	A	204	209	anti-parallel
Strand 4	A	257	262	parallel
Strand 5	A	270	275	anti-parallel
Strand 6	A	314	321	parallel
Strand 7	A	324	332	anti-parallel
Strand 8	A	338	345	anti-parallel
Strand 9	A	166	171	anti-parallel
Strand 10	A	136	142	anti-parallel
Strand 11	A	123	130	anti-parallel
Strand 12	A	80	87	parallel
Strand 13	A	66	72	anti-parallel
Strand 14	A	21	27	parallel
Strand 15	A	10	18	anti-parallel
Strand 16	A	347	356	anti-parallel
Strand 17	C	347	356	anti-parallel
Strand 18	C	10	18	anti-parallel
Strand 19	C	21	27	anti-parallel
Strand 20	C	66	72	parallel
Strand 21	C	80	87	anti-parallel
Strand 22	C	123	130	parallel
Strand 23	C	136	142	anti-parallel
Strand 24	C	166	171	anti-parallel
Strand 25	C	338	345	anti-parallel
Strand 26	C	324	332	anti-parallel
Strand 27	C	314	321	anti-parallel
Strand 28	C	270	275	parallel
Strand 29	C	257	262	anti-parallel
Strand 30	C	204	209	parallel
Strand 31	C	194	200	anti-parallel
Strand 32	C	189	191	anti-parallel

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There are 12 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	94	95	first strand
Strand 2	D	80	87	anti-parallel
Strand 3	D	66	72	anti-parallel
Strand 4	D	21	27	parallel
Strand 5	D	10	18	anti-parallel
Strand 6	D	347	356	anti-parallel
Strand 7	B	347	356	anti-parallel
Strand 8	B	10	18	anti-parallel
Strand 9	B	21	27	anti-parallel
Strand 10	B	66	72	parallel
Strand 11	B	80	87	anti-parallel
Strand 12	B	94	95	anti-parallel

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There are 32 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	189	191	first strand
Strand 2	D	194	200	anti-parallel
Strand 3	D	204	209	anti-parallel
Strand 4	D	257	262	parallel
Strand 5	D	270	275	anti-parallel
Strand 6	D	314	321	parallel
Strand 7	D	324	332	anti-parallel
Strand 8	D	338	345	anti-parallel
Strand 9	D	166	171	anti-parallel
Strand 10	D	135	142	anti-parallel
Strand 11	D	123	130	anti-parallel
Strand 12	D	80	87	parallel
Strand 13	D	66	72	anti-parallel
Strand 14	D	21	27	parallel
Strand 15	D	10	18	anti-parallel
Strand 16	D	347	356	anti-parallel
Strand 17	B	347	356	anti-parallel
Strand 18	B	10	18	anti-parallel
Strand 19	B	21	27	anti-parallel
Strand 20	B	66	72	parallel
Strand 21	B	80	87	anti-parallel
Strand 22	B	123	130	parallel
Strand 23	B	136	142	anti-parallel
Strand 24	B	166	171	anti-parallel
Strand 25	B	338	345	anti-parallel
Strand 26	B	324	332	anti-parallel
Strand 27	B	314	321	anti-parallel
Strand 28	B	270	275	parallel
Strand 29	B	257	262	anti-parallel
Strand 30	B	204	209	parallel
Strand 31	B	194	200	anti-parallel
Strand 32	B	189	191	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6P3H

Analysis of interatomic Contacts of Structural Units in PDB entry:
6P3H