Analysis of interatomic Contacts of Structural Units in PDB entry:
6P3J


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6P3J entry

There are 2 chains in PDB entry 6P3J (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 8HIS 360
B
 PRO 2HIS 361
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 6P3J. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
29 31Right-handed 310
Helix 2
AA2
A
34 47Right-handed alpha
Helix 3
AA3
A
61 64Right-handed 310
Helix 4
AA4
A
103 114Right-handed alpha
Helix 5
AA5
A
144 147Right-handed 310
Helix 6
AA6
A
211 214Right-handed 310
Helix 7
AA7
A
220 226Right-handed alpha
Helix 8
AA8
A
227 241Right-handed alpha
Helix 9
AA9
A
285 296Right-handed alpha
Helix 10
AB1
A
301 307Right-handed alpha
Helix 11
AB2
B
29 31Right-handed 310
Helix 12
AB3
B
34 47Right-handed alpha
Helix 13
AB4
B
61 64Right-handed 310
Helix 14
AB5
B
103 114Right-handed alpha
Helix 15
AB6
B
144 147Right-handed 310
Helix 16
AB7
B
211 214Right-handed 310
Helix 17
AB8
B
220 226Right-handed alpha
Helix 18
AB9
B
227 240Right-handed alpha
Helix 19
AC1
B
285 296Right-handed alpha
Helix 20
AC2
B
302 306Right-handed 310
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There are 2 sheets in PDB entry 6P3J. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 12 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
94 95first strand
Strand 2
A
80 87anti-parallel
Strand 3
A
66 72anti-parallel
Strand 4
A
21 27parallel
Strand 5
A
10 18anti-parallel
Strand 6
A
347 356anti-parallel
Strand 7
B
347 358anti-parallel
Strand 8
B
8 18anti-parallel
Strand 9
B
21 27anti-parallel
Strand 10
B
66 72parallel
Strand 11
B
80 87anti-parallel
Strand 12
B
94 95anti-parallel
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There are 32 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
189 191first strand
Strand 2
A
194 200anti-parallel
Strand 3
A
204 209anti-parallel
Strand 4
A
257 262parallel
Strand 5
A
270 275anti-parallel
Strand 6
A
314 321parallel
Strand 7
A
324 332anti-parallel
Strand 8
A
338 345anti-parallel
Strand 9
A
166 171anti-parallel
Strand 10
A
135 142anti-parallel
Strand 11
A
123 130anti-parallel
Strand 12
A
80 87parallel
Strand 13
A
66 72anti-parallel
Strand 14
A
21 27parallel
Strand 15
A
10 18anti-parallel
Strand 16
A
347 356anti-parallel
Strand 17
B
347 358anti-parallel
Strand 18
B
8 18anti-parallel
Strand 19
B
21 27anti-parallel
Strand 20
B
66 72parallel
Strand 21
B
80 87anti-parallel
Strand 22
B
123 130parallel
Strand 23
B
136 142anti-parallel
Strand 24
B
166 171anti-parallel
Strand 25
B
340 345anti-parallel
Strand 26
B
324 331anti-parallel
Strand 27
B
314 321anti-parallel
Strand 28
B
270 275parallel
Strand 29
B
257 262anti-parallel
Strand 30
B
204 209parallel
Strand 31
B
194 200anti-parallel
Strand 32
B
190 191anti-parallel
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