Analysis of interatomic Contacts of Structural Units in PDB entry:
6P3O


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6P3O entry

There is 1 chain in PDB entry 6P3O (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 10LYS 358
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 6P3O. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
12 22Right-handed alpha
Helix 2
AA2
A
26 46Right-handed alpha
Helix 3
AA3
A
49 67Right-handed alpha
Helix 4
AA4
A
84 92Right-handed alpha
Helix 5
AA5
A
109 125Right-handed alpha
Helix 6
AA6
A
141 151Right-handed alpha
Helix 7
AA7
A
162 176Right-handed alpha
Helix 8
AA8
A
205 209Right-handed 310
Helix 9
AA9
A
211 222Right-handed alpha
Helix 10
AB1
A
251 257Right-handed alpha
Helix 11
AB2
A
268 273Right-handed 310
Helix 12
AB3
A
287 304Right-handed alpha
Helix 13
AB4
A
304 317Right-handed alpha
Helix 14
AB5
A
318 342Right-handed alpha
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There are 2 sheets in PDB entry 6P3O. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
181 185first strand
Strand 2
A
155 160parallel
Strand 3
A
132 136parallel
Strand 4
A
199 203parallel
Strand 5
A
228 236parallel
Strand 6
A
263 266parallel
Strand 7
A
241 242anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
181 185first strand
Strand 2
A
155 160parallel
Strand 3
A
132 136parallel
Strand 4
A
199 203parallel
Strand 5
A
228 236parallel
Strand 6
A
348 357anti-parallel
Strand 7
A
277 285anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il