Analysis of interatomic Contacts of Structural Units in PDB entry:
6P47


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6P47 entry

There are 2 chains in PDB entry 6P47 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 46HIS 880
B
 ASP 46HIS 880
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 48 helices in PDB entry 6P47. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
90 109Right-handed alpha
Helix 2
AA2
A
131 140Right-handed alpha
Helix 3
AA3
A
205 219Right-handed alpha
Helix 4
AA4
A
229 239Right-handed alpha
Helix 5
AA5
A
264 272Right-handed alpha
Helix 6
AA6
A
284 292Right-handed alpha
Helix 7
AA7
A
294 327Right-handed alpha
Helix 8
AA8
A
360 363Right-handed 310
Helix 9
AA9
A
364 376Right-handed alpha
Helix 10
AB1
A
377 401Right-handed alpha
Helix 11
AB2
A
403 408Right-handed alpha
Helix 12
AB3
A
446 462Right-handed alpha
Helix 13
AB4
A
463 486Right-handed alpha
Helix 14
AB5
A
503 537Right-handed alpha
Helix 15
AB6
A
543 572Right-handed alpha
Helix 16
AB7
A
602 637Right-handed alpha
Helix 17
AB8
A
651 655Right-handed 310
Helix 18
AB9
A
664 680Right-handed alpha
Helix 19
AC1
A
687 709Right-handed alpha
Helix 20
AC2
A
725 747Right-handed alpha
Helix 21
AC3
A
750 760Right-handed alpha
Helix 22
AC4
A
825 857Right-handed alpha
Helix 23
AC5
A
863 868Right-handed alpha
Helix 24
AC6
A
868 880Right-handed alpha
Helix 25
AC7
B
90 109Right-handed alpha
Helix 26
AC8
B
131 140Right-handed alpha
Helix 27
AC9
B
205 219Right-handed alpha
Helix 28
AD1
B
229 239Right-handed alpha
Helix 29
AD2
B
264 272Right-handed alpha
Helix 30
AD3
B
284 292Right-handed alpha
Helix 31
AD4
B
294 327Right-handed alpha
Helix 32
AD5
B
360 363Right-handed 310
Helix 33
AD6
B
364 376Right-handed alpha
Helix 34
AD7
B
377 401Right-handed alpha
Helix 35
AD8
B
403 408Right-handed alpha
Helix 36
AD9
B
446 462Right-handed alpha
Helix 37
AE1
B
463 486Right-handed alpha
Helix 38
AE2
B
503 537Right-handed alpha
Helix 39
AE3
B
543 572Right-handed alpha
Helix 40
AE4
B
602 637Right-handed alpha
Helix 41
AE5
B
651 655Right-handed 310
Helix 42
AE6
B
664 680Right-handed alpha
Helix 43
AE7
B
687 709Right-handed alpha
Helix 44
AE8
B
725 747Right-handed alpha
Helix 45
AE9
B
750 760Right-handed alpha
Helix 46
AF1
B
825 857Right-handed alpha
Helix 47
AF2
B
863 868Right-handed alpha
Helix 48
AF3
B
868 880Right-handed alpha
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There are 4 sheets in PDB entry 6P47. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
125 127first strand
Strand 2
A
73 76anti-parallel
Strand 3
A
245 247anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
145 146first strand
Strand 2
A
190 191anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
125 127first strand
Strand 2
B
73 76anti-parallel
Strand 3
B
245 247anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
145 146first strand
Strand 2
B
190 191anti-parallel
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