Analysis of interatomic Contacts of Structural Units in PDB entry:
6P48


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6P48 entry

There are 2 chains in PDB entry 6P48 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 70LYS 862
B
 ARG 70LYS 862
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 50 helices in PDB entry 6P48. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
91 104Right-handed alpha
Helix 2
AA2
A
205 220Right-handed alpha
Helix 3
AA3
A
233 239Right-handed alpha
Helix 4
AA4
A
267 272Right-handed alpha
Helix 5
AA5
A
285 290Right-handed alpha
Helix 6
AA6
A
296 310Right-handed alpha
Helix 7
AA7
A
311 326Right-handed alpha
Helix 8
AA8
A
371 376Right-handed alpha
Helix 9
AA9
A
381 408Right-handed alpha
Helix 10
AB1
A
452 456Right-handed alpha
Helix 11
AB2
A
456 480Right-handed alpha
Helix 12
AB3
A
480 486Right-handed alpha
Helix 13
AB4
A
504 537Right-handed alpha
Helix 14
AB5
A
543 551Right-handed alpha
Helix 15
AB6
A
551 573Right-handed alpha
Helix 16
AB7
A
585 589Right-handed 310
Helix 17
AB8
A
601 614Right-handed alpha
Helix 18
AB9
A
615 620Right-handed alpha
Helix 19
AC1
A
638 646Right-handed alpha
Helix 20
AC2
A
649 654Right-handed alpha
Helix 21
AC3
A
664 679Right-handed alpha
Helix 22
AC4
A
687 709Right-handed alpha
Helix 23
AC5
A
725 747Right-handed alpha
Helix 24
AC6
A
750 760Right-handed alpha
Helix 25
AC7
A
825 857Right-handed alpha
Helix 26
AC8
B
91 104Right-handed alpha
Helix 27
AC9
B
205 220Right-handed alpha
Helix 28
AD1
B
233 239Right-handed alpha
Helix 29
AD2
B
267 272Right-handed alpha
Helix 30
AD3
B
285 290Right-handed alpha
Helix 31
AD4
B
296 310Right-handed alpha
Helix 32
AD5
B
311 326Right-handed alpha
Helix 33
AD6
B
371 376Right-handed alpha
Helix 34
AD7
B
381 408Right-handed alpha
Helix 35
AD8
B
452 456Right-handed alpha
Helix 36
AD9
B
456 480Right-handed alpha
Helix 37
AE1
B
480 486Right-handed alpha
Helix 38
AE2
B
504 537Right-handed alpha
Helix 39
AE3
B
543 551Right-handed alpha
Helix 40
AE4
B
551 573Right-handed alpha
Helix 41
AE5
B
585 589Right-handed 310
Helix 42
AE6
B
601 614Right-handed alpha
Helix 43
AE7
B
615 620Right-handed alpha
Helix 44
AE8
B
638 646Right-handed alpha
Helix 45
AE9
B
649 654Right-handed alpha
Helix 46
AF1
B
664 679Right-handed alpha
Helix 47
AF2
B
687 709Right-handed alpha
Helix 48
AF3
B
725 747Right-handed alpha
Helix 49
AF4
B
750 760Right-handed alpha
Helix 50
AF5
B
825 857Right-handed alpha
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There are 2 sheets in PDB entry 6P48. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
73 76first strand
Strand 2
A
244 247anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
73 76first strand
Strand 2
B
244 247anti-parallel
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