Analysis of interatomic Contacts of Structural Units in PDB entry:
6P5W


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6P5W entry

There is 1 chain in PDB entry 6P5W (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS -12SER 1256
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 6P5W. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
-9 -4Right-handed 310
Helix 2
AA2
A
2 11Right-handed alpha
Helix 3
AA3
A
38 51Right-handed alpha
Helix 4
AA4
A
59 80Right-handed alpha
Helix 5
AA5
A
84 91Right-handed alpha
Helix 6
AA6
A
92 113Right-handed alpha
Helix 7
AA7
A
114 123Right-handed alpha
Helix 8
AA8
A
125 135Right-handed alpha
Helix 9
AA9
A
136 142Right-handed alpha
Helix 10
AB1
A
142 156Right-handed alpha
Helix 11
AB2
A
158 1072Right-handed alpha
Helix 12
AB3
A
1082 1093Right-handed alpha
Helix 13
AB4
A
1099 1109Right-handed alpha
Helix 14
AB5
A
1119 1129Right-handed alpha
Helix 15
AB6
A
1133 1148Right-handed alpha
Helix 16
AB7
A
1150 1166Right-handed alpha
Helix 17
AB8
A
1174 1187Right-handed alpha
Helix 18
AB9
A
1192 1203Right-handed alpha
Helix 19
AC1
A
1209 1223Right-handed alpha
Helix 20
AC2
A
1237 1247Right-handed alpha
Helix 21
AC3
A
1247 1256Right-handed alpha
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There are 2 sheets in PDB entry 6P5W. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
14 19first strand
Strand 2
A
25 28anti-parallel
Strand 3
A
31 34anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1073 1074first strand
Strand 2
A
1077 1081anti-parallel
Strand 3
A
1117 1118anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il