Analysis of interatomic Contacts of Structural Units in PDB entry:
6P63

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6P63 entry

There are 2 chains in PDB entry 6P63 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 2	ARG 595
B	SER 2	GLY 46

There are132 helices in PDB entry 6P63. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	2	7	Right-handed alpha
Helix 2	AA2	A	11	33	Right-handed alpha
Helix 3	AA3	A	77	80	Right-handed 310
Helix 4	AA4	A	92	100	Right-handed alpha
Helix 5	AA5	A	100	105	Right-handed alpha
Helix 6	AA6	A	110	131	Right-handed alpha
Helix 7	AA7	A	135	143	Right-handed alpha
Helix 8	AA8	A	144	152	Right-handed alpha
Helix 9	AA9	A	169	177	Right-handed alpha
Helix 10	AB1	A	178	181	Right-handed 310
Helix 11	AB2	A	205	215	Right-handed alpha
Helix 12	AB3	A	215	229	Right-handed alpha
Helix 13	AB4	A	232	234	Right-handed 310
Helix 14	AB5	A	242	249	Right-handed alpha
Helix 15	AB6	A	249	254	Right-handed alpha
Helix 16	AB7	A	254	260	Right-handed alpha
Helix 17	AB8	A	310	314	Right-handed 310
Helix 18	AB9	A	315	330	Right-handed alpha
Helix 19	AC1	A	330	337	Right-handed alpha
Helix 20	AC2	A	351	357	Right-handed alpha
Helix 21	AC3	A	362	366	Right-handed 310
Helix 22	AC4	A	376	380	Right-handed 310
Helix 23	AC5	A	390	394	Right-handed 310
Helix 24	AC6	A	401	411	Right-handed alpha
Helix 25	AC7	A	413	426	Right-handed alpha
Helix 26	AC8	A	426	437	Right-handed alpha
Helix 27	AC9	A	478	483	Right-handed 310
Helix 28	AD1	A	489	493	Right-handed 310
Helix 29	AD2	A	494	499	Right-handed alpha
Helix 30	AD3	A	505	516	Right-handed alpha
Helix 31	AD4	A	520	538	Right-handed alpha
Helix 32	AD5	A	539	541	Right-handed 310
Helix 33	AD6	A	542	549	Right-handed alpha
Helix 34	AD7	A	561	568	Right-handed alpha
Helix 35	AD8	B	4	8	Right-handed 310
Helix 36	AD9	B	11	33	Right-handed alpha
Helix 37	AE1	B	77	80	Right-handed 310
Helix 38	AE2	B	92	100	Right-handed alpha
Helix 39	AE3	B	100	105	Right-handed alpha
Helix 40	AE4	B	110	129	Right-handed alpha
Helix 41	AE5	B	135	143	Right-handed alpha
Helix 42	AE6	B	144	152	Right-handed alpha
Helix 43	AE7	B	169	177	Right-handed alpha
Helix 44	AE8	B	178	181	Right-handed 310
Helix 45	AE9	B	205	215	Right-handed alpha
Helix 46	AF1	B	215	229	Right-handed alpha
Helix 47	AF2	B	232	234	Right-handed 310
Helix 48	AF3	B	242	249	Right-handed alpha
Helix 49	AF4	B	249	254	Right-handed alpha
Helix 50	AF5	B	254	260	Right-handed alpha
Helix 51	AF6	B	310	314	Right-handed 310
Helix 52	AF7	B	315	330	Right-handed alpha
Helix 53	AF8	B	330	337	Right-handed alpha
Helix 54	AF9	B	351	357	Right-handed alpha
Helix 55	AG1	B	362	366	Right-handed 310
Helix 56	AG2	B	376	380	Right-handed 310
Helix 57	AG3	B	390	394	Right-handed 310
Helix 58	AG4	B	401	411	Right-handed alpha
Helix 59	AG5	B	413	426	Right-handed alpha
Helix 60	AG6	B	426	437	Right-handed alpha
Helix 61	AG7	B	443	445	Right-handed 310
Helix 62	AG8	B	478	483	Right-handed 310
Helix 63	AG9	B	489	494	Right-handed alpha
Helix 64	AH1	B	494	499	Right-handed alpha
Helix 65	AH2	B	505	516	Right-handed alpha
Helix 66	AH3	B	520	539	Right-handed alpha
Helix 67	AH4	B	542	549	Right-handed alpha
Helix 68	AH5	B	561	568	Right-handed alpha
Helix 69	AH6	C	2	7	Right-handed alpha
Helix 70	AH7	C	11	33	Right-handed alpha
Helix 71	AH8	C	77	80	Right-handed 310
Helix 72	AH9	C	92	100	Right-handed alpha
Helix 73	AI1	C	110	131	Right-handed alpha
Helix 74	AI2	C	135	143	Right-handed alpha
Helix 75	AI3	C	144	152	Right-handed alpha
Helix 76	AI4	C	169	177	Right-handed alpha
Helix 77	AI5	C	178	181	Right-handed 310
Helix 78	AI6	C	205	215	Right-handed alpha
Helix 79	AI7	C	215	229	Right-handed alpha
Helix 80	AI8	C	232	234	Right-handed 310
Helix 81	AI9	C	242	249	Right-handed alpha
Helix 82	AJ1	C	249	254	Right-handed alpha
Helix 83	AJ2	C	254	260	Right-handed alpha
Helix 84	AJ3	C	310	314	Right-handed 310
Helix 85	AJ4	C	315	330	Right-handed alpha
Helix 86	AJ5	C	330	337	Right-handed alpha
Helix 87	AJ6	C	351	357	Right-handed alpha
Helix 88	AJ7	C	362	366	Right-handed 310
Helix 89	AJ8	C	376	380	Right-handed 310
Helix 90	AJ9	C	390	394	Right-handed 310
Helix 91	AK1	C	401	411	Right-handed alpha
Helix 92	AK2	C	413	437	Right-handed alpha
Helix 93	AK3	C	478	483	Right-handed 310
Helix 94	AK4	C	489	493	Right-handed 310
Helix 95	AK5	C	494	499	Right-handed alpha
Helix 96	AK6	C	505	516	Right-handed alpha
Helix 97	AK7	C	520	538	Right-handed alpha
Helix 98	AK8	C	539	541	Right-handed 310
Helix 99	AK9	C	542	549	Right-handed alpha
Helix 100	AL1	C	560	568	Right-handed alpha
Helix 101	AL2	D	3	8	Right-handed 310
Helix 102	AL3	D	11	33	Right-handed alpha
Helix 103	AL4	D	77	80	Right-handed 310
Helix 104	AL5	D	92	100	Right-handed alpha
Helix 105	AL6	D	110	131	Right-handed alpha
Helix 106	AL7	D	135	143	Right-handed alpha
Helix 107	AL8	D	144	152	Right-handed alpha
Helix 108	AL9	D	169	177	Right-handed alpha
Helix 109	AM1	D	178	181	Right-handed 310
Helix 110	AM2	D	205	215	Right-handed alpha
Helix 111	AM3	D	215	229	Right-handed alpha
Helix 112	AM4	D	232	234	Right-handed 310
Helix 113	AM5	D	242	249	Right-handed alpha
Helix 114	AM6	D	254	260	Right-handed alpha
Helix 115	AM7	D	310	314	Right-handed 310
Helix 116	AM8	D	315	329	Right-handed alpha
Helix 117	AM9	D	330	337	Right-handed alpha
Helix 118	AN1	D	351	357	Right-handed alpha
Helix 119	AN2	D	362	366	Right-handed 310
Helix 120	AN3	D	376	380	Right-handed 310
Helix 121	AN4	D	390	394	Right-handed 310
Helix 122	AN5	D	401	411	Right-handed alpha
Helix 123	AN6	D	413	426	Right-handed alpha
Helix 124	AN7	D	426	437	Right-handed alpha
Helix 125	AN8	D	478	483	Right-handed 310
Helix 126	AN9	D	494	499	Right-handed alpha
Helix 127	AO1	D	505	516	Right-handed alpha
Helix 128	AO2	D	520	538	Right-handed alpha
Helix 129	AO3	D	539	541	Right-handed 310
Helix 130	AO4	D	542	549	Right-handed alpha
Helix 131	AO5	D	561	568	Right-handed alpha
Helix 132	AO6	D	577	581	Right-handed 310

There are 32 sheets in PDB entry 6P63. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	49	53	first strand
Strand 2	A	59	68	anti-parallel
Strand 3	A	72	75	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	49	53	first strand
Strand 2	A	59	68	anti-parallel
Strand 3	A	81	84	anti-parallel
Strand 4	A	87	89	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	236	241	first strand
Strand 2	A	187	192	anti-parallel
Strand 3	A	263	268	anti-parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	196	200	first strand
Strand 2	A	343	349	anti-parallel
Strand 3	A	369	373	anti-parallel
Strand 4	A	292	295	anti-parallel
Strand 5	A	281	284	anti-parallel
Strand 6	A	273	275	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	297	301	first strand
Strand 2	A	304	306	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	339	340	first strand
Strand 2	A	455	461	parallel
Strand 3	A	447	452	anti-parallel
Strand 4	A	384	388	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	438	439	first strand
Strand 2	A	469	471	anti-parallel
Strand 3	A	485	486	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	555	559	first strand
Strand 2	A	584	589	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	39	40	first strand
Strand 2	B	49	53	anti-parallel
Strand 3	B	60	68	anti-parallel
Strand 4	B	72	75	anti-parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	39	40	first strand
Strand 2	B	49	53	anti-parallel
Strand 3	B	60	68	anti-parallel
Strand 4	B	81	84	anti-parallel
Strand 5	B	87	89	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	236	241	first strand
Strand 2	B	187	192	anti-parallel
Strand 3	B	263	268	anti-parallel

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There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	196	200	first strand
Strand 2	B	343	349	anti-parallel
Strand 3	B	369	373	anti-parallel
Strand 4	B	292	295	anti-parallel
Strand 5	B	281	284	anti-parallel
Strand 6	B	273	275	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	297	301	first strand
Strand 2	B	304	306	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	339	340	first strand
Strand 2	B	455	461	parallel
Strand 3	B	447	452	anti-parallel
Strand 4	B	385	388	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	438	439	first strand
Strand 2	B	469	471	anti-parallel
Strand 3	B	485	486	parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	555	559	first strand
Strand 2	B	584	589	anti-parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	39	41	first strand
Strand 2	C	49	53	anti-parallel
Strand 3	C	60	68	anti-parallel
Strand 4	C	72	75	anti-parallel

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There are 5 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	39	41	first strand
Strand 2	C	49	53	anti-parallel
Strand 3	C	60	68	anti-parallel
Strand 4	C	81	84	anti-parallel
Strand 5	C	87	88	anti-parallel

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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	236	241	first strand
Strand 2	C	187	192	anti-parallel
Strand 3	C	263	268	anti-parallel

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There are 6 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	196	200	first strand
Strand 2	C	343	349	anti-parallel
Strand 3	C	369	373	anti-parallel
Strand 4	C	292	295	anti-parallel
Strand 5	C	281	284	anti-parallel
Strand 6	C	273	275	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	297	301	first strand
Strand 2	C	304	306	anti-parallel

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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	339	340	first strand
Strand 2	C	455	461	parallel
Strand 3	C	447	452	anti-parallel
Strand 4	C	385	388	anti-parallel

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There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	438	439	first strand
Strand 2	C	469	471	anti-parallel
Strand 3	C	485	486	parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	555	559	first strand
Strand 2	C	584	589	anti-parallel

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There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	39	40	first strand
Strand 2	D	49	53	anti-parallel
Strand 3	D	60	68	anti-parallel
Strand 4	D	72	75	anti-parallel

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There are 5 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	39	40	first strand
Strand 2	D	49	53	anti-parallel
Strand 3	D	60	68	anti-parallel
Strand 4	D	81	84	anti-parallel
Strand 5	D	87	89	anti-parallel

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There are 3 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	236	241	first strand
Strand 2	D	187	192	anti-parallel
Strand 3	D	263	268	anti-parallel

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There are 6 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	196	200	first strand
Strand 2	D	343	349	anti-parallel
Strand 3	D	369	373	anti-parallel
Strand 4	D	292	295	anti-parallel
Strand 5	D	281	284	anti-parallel
Strand 6	D	273	275	anti-parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	297	301	first strand
Strand 2	D	304	306	anti-parallel

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There are 4 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	339	340	first strand
Strand 2	D	455	461	parallel
Strand 3	D	447	452	anti-parallel
Strand 4	D	384	388	anti-parallel

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There are 3 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	438	439	first strand
Strand 2	D	469	471	anti-parallel
Strand 3	D	485	486	parallel

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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	555	560	first strand
Strand 2	D	583	589	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6P63

Analysis of interatomic Contacts of Structural Units in PDB entry:
6P63