Analysis of interatomic Contacts of Structural Units in PDB entry:
6P6F


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6P6F entry

There are 2 chains in PDB entry 6P6F (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 691CYS 891
B
 HIS 6ILE 155
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 6P6F. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
691 699Right-handed alpha
Helix 2
AA2
A
708 722Right-handed alpha
Helix 3
AA3
A
735 743Right-handed alpha
Helix 4
AA4
A
744 750Right-handed 310
Helix 5
AA5
A
760 770Right-handed alpha
Helix 6
AA6
A
781 792Right-handed alpha
Helix 7
AA7
A
801 811Right-handed alpha
Helix 8
AA8
A
820 832Right-handed alpha
Helix 9
AA9
A
851 858Right-handed alpha
Helix 10
AB1
A
866 871Right-handed alpha
Helix 11
AB2
A
873 890Right-handed alpha
Helix 12
AB3
B
22 42Right-handed alpha
Helix 13
AB4
B
54 56Right-handed 310
Helix 14
AB5
B
57 67Right-handed alpha
Helix 15
AB6
B
88 107Right-handed alpha
Helix 16
AB7
B
123 153Right-handed alpha
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There are 4 sheets in PDB entry 6P6F. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
752 756first strand
Strand 2
A
726 730parallel
Strand 3
A
700 704parallel
Strand 4
A
863 865parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
774 776first strand
Strand 2
A
794 796parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
798 799first strand
Strand 2
A
815 818parallel
Strand 3
A
840 843parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
45 52first strand
Strand 2
B
12 19parallel
Strand 3
B
73 79parallel
Strand 4
B
110 115parallel
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