Analysis of interatomic Contacts of Structural Units in PDB entry:
6P7B


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6P7B entry

There are 6 chains in PDB entry 6P7B (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LYS 149
B
 MET 1LEU 148
C
 MET 1LEU 148
D
 ILE 2LEU 147
E
 A 1 A 29
F
 T 1 T 29
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 6P7B. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
40 51Right-handed alpha
Helix 2
AA2
A
66 80Right-handed alpha
Helix 3
AA3
A
97 113Right-handed alpha
Helix 4
AA4
A
113 118Right-handed alpha
Helix 5
AA5
A
119 126Right-handed alpha
Helix 6
AA6
A
132 146Right-handed alpha
Helix 7
AA7
B
40 51Right-handed alpha
Helix 8
AA8
B
67 79Right-handed alpha
Helix 9
AA9
B
100 113Right-handed alpha
Helix 10
AB1
B
113 118Right-handed alpha
Helix 11
AB2
B
119 125Right-handed alpha
Helix 12
AB3
B
132 146Right-handed alpha
Helix 13
AB4
C
40 51Right-handed alpha
Helix 14
AB5
C
67 81Right-handed alpha
Helix 15
AB6
C
98 113Right-handed alpha
Helix 16
AB7
C
113 118Right-handed alpha
Helix 17
AB8
C
119 127Right-handed alpha
Helix 18
AB9
C
132 146Right-handed alpha
Helix 19
AC1
D
40 50Right-handed alpha
Helix 20
AC2
D
67 79Right-handed alpha
Helix 21
AC3
D
100 113Right-handed alpha
Helix 22
AC4
D
113 118Right-handed alpha
Helix 23
AC5
D
119 125Right-handed alpha
Helix 24
AC6
D
132 146Right-handed alpha
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There are 4 sheets in PDB entry 6P7B. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
27 34first strand
Strand 2
A
14 20anti-parallel
Strand 3
A
2 7anti-parallel
Strand 4
A
56 60parallel
Strand 5
A
85 89parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
27 34first strand
Strand 2
B
14 20anti-parallel
Strand 3
B
2 7anti-parallel
Strand 4
B
56 60parallel
Strand 5
B
85 89parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
27 34first strand
Strand 2
C
14 20anti-parallel
Strand 3
C
2 7anti-parallel
Strand 4
C
56 60parallel
Strand 5
C
85 89parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
26 34first strand
Strand 2
D
14 21anti-parallel
Strand 3
D
3 7anti-parallel
Strand 4
D
56 60parallel
Strand 5
D
85 89parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il