Analysis of interatomic Contacts of Structural Units in PDB entry:
6P7C


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6P7C entry

There are 2 chains in PDB entry 6P7C (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1HIS 457
B
 MET 1SER 455
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 44 helices in PDB entry 6P7C. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
21 34Right-handed alpha
Helix 2
AA2
A
46 55Right-handed alpha
Helix 3
AA3
A
66 71Right-handed 310
Helix 4
AA4
A
82 96Right-handed alpha
Helix 5
AA5
A
133 147Right-handed alpha
Helix 6
AA6
A
150 161Right-handed alpha
Helix 7
AA7
A
161 169Right-handed alpha
Helix 8
AA8
A
171 183Right-handed alpha
Helix 9
AA9
A
185 194Right-handed alpha
Helix 10
AB1
A
196 209Right-handed alpha
Helix 11
AB2
A
227 231Right-handed 310
Helix 12
AB3
A
232 240Right-handed alpha
Helix 13
AB4
A
252 257Right-handed alpha
Helix 14
AB5
A
278 292Right-handed alpha
Helix 15
AB6
A
309 320Right-handed alpha
Helix 16
AB7
A
331 340Right-handed alpha
Helix 17
AB8
A
367 372Right-handed alpha
Helix 18
AB9
A
383 385Right-handed 310
Helix 19
AC1
A
386 397Right-handed alpha
Helix 20
AC2
A
425 432Right-handed alpha
Helix 21
AC3
A
443 446Right-handed 310
Helix 22
AC4
A
447 452Right-handed alpha
Helix 23
AC5
B
21 34Right-handed alpha
Helix 24
AC6
B
46 55Right-handed alpha
Helix 25
AC7
B
66 71Right-handed 310
Helix 26
AC8
B
82 97Right-handed alpha
Helix 27
AC9
B
132 147Right-handed alpha
Helix 28
AD1
B
150 158Right-handed alpha
Helix 29
AD2
B
159 162Right-handed 310
Helix 30
AD3
B
163 168Right-handed alpha
Helix 31
AD4
B
171 183Right-handed alpha
Helix 32
AD5
B
185 194Right-handed alpha
Helix 33
AD6
B
198 210Right-handed alpha
Helix 34
AD7
B
227 231Right-handed 310
Helix 35
AD8
B
232 241Right-handed alpha
Helix 36
AD9
B
252 257Right-handed alpha
Helix 37
AE1
B
278 292Right-handed alpha
Helix 38
AE2
B
309 318Right-handed alpha
Helix 39
AE3
B
331 339Right-handed alpha
Helix 40
AE4
B
367 373Right-handed alpha
Helix 41
AE5
B
386 397Right-handed alpha
Helix 42
AE6
B
425 432Right-handed alpha
Helix 43
AE7
B
443 446Right-handed 310
Helix 44
AE8
B
447 452Right-handed alpha
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There are 7 sheets in PDB entry 6P7C. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
111 112first strand
Strand 2
B
3 8anti-parallel
Strand 3
A
4 9anti-parallel
Strand 4
B
111 112anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
59 62first strand
Strand 2
A
37 42parallel
Strand 3
A
14 18parallel
Strand 4
A
75 78parallel
Strand 5
A
99 102parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
115 119first strand
Strand 2
A
122 127anti-parallel
Strand 3
B
122 127anti-parallel
Strand 4
B
115 119anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
264 267first strand
Strand 2
A
244 247parallel
Strand 3
A
295 300parallel
Strand 4
A
217 222parallel
Strand 5
A
324 327parallel
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There are 10 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
417 422first strand
Strand 2
A
404 409anti-parallel
Strand 3
A
437 441anti-parallel
Strand 4
A
376 381anti-parallel
Strand 5
A
352 357parallel
Strand 6
B
352 357anti-parallel
Strand 7
B
377 381parallel
Strand 8
B
437 441anti-parallel
Strand 9
B
404 409anti-parallel
Strand 10
B
417 422anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
59 62first strand
Strand 2
B
37 42parallel
Strand 3
B
14 18parallel
Strand 4
B
75 78parallel
Strand 5
B
99 102parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
264 267first strand
Strand 2
B
244 247parallel
Strand 3
B
295 300parallel
Strand 4
B
217 222parallel
Strand 5
B
324 327parallel
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