Analysis of interatomic Contacts of Structural Units in PDB entry:
6P7K


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6P7K entry

There is 1 chain in PDB entry 6P7K (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 22GLU 396
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 6P7K. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
30 34Right-handed 310
Helix 2
AA2
A
35 48Right-handed alpha
Helix 3
AA3
A
50 59Right-handed alpha
Helix 4
AA4
A
64 72Right-handed alpha
Helix 5
AA5
A
106 119Right-handed alpha
Helix 6
AA6
A
120 122Right-handed 310
Helix 7
AA7
A
144 155Right-handed alpha
Helix 8
AA8
A
155 165Right-handed alpha
Helix 9
AA9
A
167 173Right-handed alpha
Helix 10
AB1
A
207 227Right-handed alpha
Helix 11
AB2
A
251 256Right-handed alpha
Helix 12
AB3
A
261 279Right-handed alpha
Helix 13
AB4
A
279 301Right-handed alpha
Helix 14
AB5
A
304 317Right-handed alpha
Helix 15
AB6
A
351 356Right-handed alpha
Helix 16
AB7
A
356 367Right-handed alpha
Helix 17
AB8
A
370 395Right-handed alpha
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There are 4 sheets in PDB entry 6P7K. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
83 86first strand
Strand 2
A
98 101anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
90 91first strand
Strand 2
A
94 95anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
125 128first strand
Strand 2
A
243 250anti-parallel
Strand 3
A
336 343anti-parallel
Strand 4
A
326 330anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
176 185first strand
Strand 2
A
193 201anti-parallel
Strand 3
A
132 140anti-parallel
Strand 4
A
229 236anti-parallel
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