Analysis of interatomic Contacts of Structural Units in PDB entry:
6P7P


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6P7P entry

There are 3 chains in PDB entry 6P7P (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 1ALA 240
B
 SER 2ASN 241
C
 SER -1SER 158
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 6P7P. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
5 28Right-handed alpha
Helix 2
AA2
A
30 50Right-handed alpha
Helix 3
AA3
A
110 126Right-handed alpha
Helix 4
AA4
A
165 173Right-handed alpha
Helix 5
AA5
A
208 225Right-handed alpha
Helix 6
AA6
A
231 237Right-handed alpha
Helix 7
AA7
A
238 240Right-handed 310
Helix 8
AA8
B
5 28Right-handed alpha
Helix 9
AA9
B
30 50Right-handed alpha
Helix 10
AB1
B
110 126Right-handed alpha
Helix 11
AB2
B
165 173Right-handed alpha
Helix 12
AB3
B
208 225Right-handed alpha
Helix 13
AB4
B
231 237Right-handed alpha
Helix 14
AB5
C
5 28Right-handed alpha
Helix 15
AB6
C
30 50Right-handed alpha
Helix 16
AB7
C
110 126Right-handed alpha
Helix 17
AB8
C
165 173Right-handed alpha
Helix 18
AB9
C
208 225Right-handed alpha
Helix 19
AC1
C
231 237Right-handed alpha
Helix 20
AC2
C
238 240Right-handed 310
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There are 6 sheets in PDB entry 6P7P. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
86 88first strand
Strand 2
A
91 95anti-parallel
Strand 3
A
55 62parallel
Strand 4
A
72 77anti-parallel
Strand 5
A
99 109anti-parallel
Strand 6
A
150 158parallel
Strand 7
A
183 186parallel
Strand 8
A
190 195anti-parallel
Strand 9
A
200 205anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
134 136first strand
Strand 2
A
139 141anti-parallel
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There are 9 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
86 88first strand
Strand 2
B
91 95anti-parallel
Strand 3
B
55 62parallel
Strand 4
B
72 77anti-parallel
Strand 5
B
99 109anti-parallel
Strand 6
B
150 158parallel
Strand 7
B
183 186parallel
Strand 8
B
190 195anti-parallel
Strand 9
B
200 205anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
134 136first strand
Strand 2
B
139 141anti-parallel
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There are 9 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
86 88first strand
Strand 2
C
91 95anti-parallel
Strand 3
C
55 62parallel
Strand 4
C
72 77anti-parallel
Strand 5
C
99 109anti-parallel
Strand 6
C
150 158parallel
Strand 7
C
183 186parallel
Strand 8
C
190 195anti-parallel
Strand 9
C
200 205anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
134 136first strand
Strand 2
C
139 141anti-parallel
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