Analysis of interatomic Contacts of Structural Units in PDB entry:
6P95

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6P95 entry

There are 7 chains in PDB entry 6P95 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	THR 59	SER 255
B	THR 59	TYR 253
C	THR 59	ARG 256
D	GLN 1	SER 230
E	LEU 1	PRO 213
F	GLN 1	SER 230
G	PRO 2	PHE 102

There are 54 helices in PDB entry 6P95. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	74	81	Right-handed 310
Helix 2	AA2	A	120	126	Right-handed alpha
Helix 3	AA3	A	130	144	Right-handed alpha
Helix 4	AA4	A	157	161	Right-handed 310
Helix 5	AA5	A	182	195	Right-handed alpha
Helix 6	AA6	A	238	248	Right-handed alpha
Helix 7	AA7	B	74	81	Right-handed 310
Helix 8	AA8	B	120	126	Right-handed alpha
Helix 9	AA9	B	130	144	Right-handed alpha
Helix 10	AB1	B	157	161	Right-handed 310
Helix 11	AB2	B	182	195	Right-handed alpha
Helix 12	AB3	B	238	248	Right-handed alpha
Helix 13	AB4	C	74	81	Right-handed 310
Helix 14	AB5	C	120	126	Right-handed alpha
Helix 15	AB6	C	130	144	Right-handed alpha
Helix 16	AB7	C	157	161	Right-handed 310
Helix 17	AB8	C	182	195	Right-handed alpha
Helix 18	AB9	C	238	248	Right-handed alpha
Helix 19	AC1	D	95	99	Right-handed 310
Helix 20	AC2	D	202	207	Right-handed alpha
Helix 21	AC3	D	216	219	Right-handed 310
Helix 22	AC4	E	82	86	Right-handed 310
Helix 23	AC5	E	126	131	Right-handed alpha
Helix 24	AC6	E	186	193	Right-handed alpha
Helix 25	AC7	F	95	99	Right-handed 310
Helix 26	AC8	F	202	207	Right-handed alpha
Helix 27	AC9	F	216	219	Right-handed 310
Helix 28	AD1	G	82	86	Right-handed 310
Helix 29	AD2	G	126	131	Right-handed alpha
Helix 30	AD3	G	186	193	Right-handed alpha
Helix 31	AD4	H	95	99	Right-handed 310
Helix 32	AD5	H	202	207	Right-handed alpha
Helix 33	AD6	H	216	219	Right-handed 310
Helix 34	AD7	L	82	86	Right-handed 310
Helix 35	AD8	L	126	131	Right-handed alpha
Helix 36	AD9	L	186	193	Right-handed alpha
Helix 37	AE1	a	294	304	Right-handed alpha
Helix 38	AE2	a	307	326	Right-handed alpha
Helix 39	AE3	a	333	345	Right-handed alpha
Helix 40	AE4	a	346	359	Right-handed alpha
Helix 41	AE5	a	396	398	Right-handed 310
Helix 42	AE6	a	399	416	Right-handed alpha
Helix 43	AE7	b	294	304	Right-handed alpha
Helix 44	AE8	b	307	326	Right-handed alpha
Helix 45	AE9	b	334	345	Right-handed alpha
Helix 46	AF1	b	346	359	Right-handed alpha
Helix 47	AF2	b	396	398	Right-handed 310
Helix 48	AF3	b	399	416	Right-handed alpha
Helix 49	AF4	c	294	304	Right-handed alpha
Helix 50	AF5	c	307	326	Right-handed alpha
Helix 51	AF6	c	334	345	Right-handed alpha
Helix 52	AF7	c	346	359	Right-handed alpha
Helix 53	AF8	c	396	398	Right-handed 310
Helix 54	AF9	c	399	420	Right-handed alpha

There are 46 sheets in PDB entry 6P95. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	61	62	first strand
Strand 2	A	66	72	anti-parallel
Strand 3	a	368	374	anti-parallel
Strand 4	a	384	385	anti-parallel

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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	153	155	first strand
Strand 2	A	163	167	anti-parallel
Strand 3	A	219	226	anti-parallel
Strand 4	A	101	108	anti-parallel
Strand 5	A	92	96	anti-parallel
Strand 6	A	84	87	anti-parallel
Strand 7	A	234	237	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	61	62	first strand
Strand 2	B	66	72	anti-parallel
Strand 3	b	368	374	anti-parallel
Strand 4	b	384	385	anti-parallel

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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	153	155	first strand
Strand 2	B	163	167	anti-parallel
Strand 3	B	219	226	anti-parallel
Strand 4	B	101	108	anti-parallel
Strand 5	B	92	97	anti-parallel
Strand 6	B	84	87	anti-parallel
Strand 7	B	234	237	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	61	62	first strand
Strand 2	C	66	72	anti-parallel
Strand 3	c	368	374	anti-parallel
Strand 4	c	384	385	anti-parallel

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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	153	155	first strand
Strand 2	C	163	167	anti-parallel
Strand 3	C	219	226	anti-parallel
Strand 4	C	101	108	anti-parallel
Strand 5	C	92	97	anti-parallel
Strand 6	C	84	87	anti-parallel
Strand 7	C	234	237	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	3	7	first strand
Strand 2	D	19	26	anti-parallel
Strand 3	D	86	91	anti-parallel
Strand 4	D	76	81	anti-parallel

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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	12	13	first strand
Strand 2	D	122	126	parallel
Strand 3	D	100	107	anti-parallel
Strand 4	D	38	44	anti-parallel
Strand 5	D	50	56	anti-parallel
Strand 6	D	65	67	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	135	139	first strand
Strand 2	D	150	160	anti-parallel
Strand 3	D	191	200	anti-parallel
Strand 4	D	178	180	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	135	139	first strand
Strand 2	D	150	160	anti-parallel
Strand 3	D	191	200	anti-parallel
Strand 4	D	184	185	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	166	169	first strand
Strand 2	D	209	215	anti-parallel
Strand 3	D	220	226	anti-parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	9	13	first strand
Strand 2	E	106	110	parallel
Strand 3	E	88	93	anti-parallel
Strand 4	E	36	41	anti-parallel
Strand 5	E	48	51	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	9	13	first strand
Strand 2	E	106	110	parallel
Strand 3	E	88	93	anti-parallel
Strand 4	E	101	102	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	19	24	first strand
Strand 2	E	73	78	anti-parallel
Strand 3	E	65	70	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	119	123	first strand
Strand 2	E	135	144	anti-parallel
Strand 3	E	177	185	anti-parallel
Strand 4	E	164	166	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	119	123	first strand
Strand 2	E	135	144	anti-parallel
Strand 3	E	177	185	anti-parallel
Strand 4	E	170	171	anti-parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	158	160	first strand
Strand 2	E	150	155	anti-parallel
Strand 3	E	196	202	anti-parallel
Strand 4	E	205	211	anti-parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	3	7	first strand
Strand 2	F	18	26	anti-parallel
Strand 3	F	86	92	anti-parallel
Strand 4	F	76	81	anti-parallel

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There are 6 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	12	13	first strand
Strand 2	F	122	126	parallel
Strand 3	F	100	107	anti-parallel
Strand 4	F	38	44	anti-parallel
Strand 5	F	50	56	anti-parallel
Strand 6	F	65	67	anti-parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	135	139	first strand
Strand 2	F	150	160	anti-parallel
Strand 3	F	191	200	anti-parallel
Strand 4	F	178	180	anti-parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	135	139	first strand
Strand 2	F	150	160	anti-parallel
Strand 3	F	191	200	anti-parallel
Strand 4	F	184	185	anti-parallel

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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	166	169	first strand
Strand 2	F	209	215	anti-parallel
Strand 3	F	220	226	anti-parallel

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There are 5 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	9	13	first strand
Strand 2	G	106	110	parallel
Strand 3	G	88	93	anti-parallel
Strand 4	G	36	41	anti-parallel
Strand 5	G	48	51	anti-parallel

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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	9	13	first strand
Strand 2	G	106	110	parallel
Strand 3	G	88	93	anti-parallel
Strand 4	G	101	102	anti-parallel

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There are 3 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	19	24	first strand
Strand 2	G	73	78	anti-parallel
Strand 3	G	65	70	anti-parallel

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There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	119	123	first strand
Strand 2	G	135	144	anti-parallel
Strand 3	G	177	185	anti-parallel
Strand 4	G	164	166	anti-parallel

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There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	119	123	first strand
Strand 2	G	135	144	anti-parallel
Strand 3	G	177	185	anti-parallel
Strand 4	G	170	171	anti-parallel

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There are 4 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	159	160	first strand
Strand 2	G	150	155	anti-parallel
Strand 3	G	196	202	anti-parallel
Strand 4	G	205	211	anti-parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	3	5	first strand
Strand 2	H	24	26	anti-parallel

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There are 6 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	12	13	first strand
Strand 2	H	122	126	parallel
Strand 3	H	100	107	anti-parallel
Strand 4	H	38	44	anti-parallel
Strand 5	H	50	56	anti-parallel
Strand 6	H	65	67	anti-parallel

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There are 3 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	18	21	first strand
Strand 2	H	86	92	anti-parallel
Strand 3	H	76	81	anti-parallel

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There are 4 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	135	139	first strand
Strand 2	H	150	160	anti-parallel
Strand 3	H	191	200	anti-parallel
Strand 4	H	178	180	anti-parallel

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There are 4 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	135	139	first strand
Strand 2	H	150	160	anti-parallel
Strand 3	H	191	200	anti-parallel
Strand 4	H	184	185	anti-parallel

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There are 3 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	166	169	first strand
Strand 2	H	209	215	anti-parallel
Strand 3	H	220	226	anti-parallel

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There are 5 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	9	13	first strand
Strand 2	L	106	110	parallel
Strand 3	L	88	93	anti-parallel
Strand 4	L	36	41	anti-parallel
Strand 5	L	48	51	anti-parallel

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There are 4 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	9	13	first strand
Strand 2	L	106	110	parallel
Strand 3	L	88	93	anti-parallel
Strand 4	L	101	102	anti-parallel

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There are 3 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	19	24	first strand
Strand 2	L	73	78	anti-parallel
Strand 3	L	65	70	anti-parallel

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There are 4 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	119	123	first strand
Strand 2	L	135	144	anti-parallel
Strand 3	L	177	185	anti-parallel
Strand 4	L	164	166	anti-parallel

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There are 4 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	119	123	first strand
Strand 2	L	135	144	anti-parallel
Strand 3	L	177	185	anti-parallel
Strand 4	L	170	171	anti-parallel

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There are 4 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	158	160	first strand
Strand 2	L	150	155	anti-parallel
Strand 3	L	196	202	anti-parallel
Strand 4	L	205	211	anti-parallel

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There are 2 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	a	278	280	first strand
Strand 2	a	291	293	anti-parallel

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There are 2 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	a	388	389	first strand
Strand 2	a	392	393	anti-parallel

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There are 2 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	b	278	280	first strand
Strand 2	b	291	293	anti-parallel

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There are 2 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	b	388	389	first strand
Strand 2	b	392	393	anti-parallel

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There are 2 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	c	278	280	first strand
Strand 2	c	291	293	anti-parallel

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There are 2 strands in AF1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	c	388	389	first strand
Strand 2	c	392	393	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6P95

Analysis of interatomic Contacts of Structural Units in PDB entry:
6P95