Analysis of interatomic Contacts of Structural Units in PDB entry:
6P9M


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6P9M entry

There is 1 chain in PDB entry 6P9M (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 3TYR 416
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 6P9M. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
28 38Right-handed alpha
Helix 2
AA2
A
48 55Right-handed alpha
Helix 3
AA3
A
67 72Right-handed 310
Helix 4
AA4
A
75 80Right-handed alpha
Helix 5
AA5
A
81 98Right-handed alpha
Helix 6
AA6
A
104 106Right-handed 310
Helix 7
AA7
A
119 133Right-handed alpha
Helix 8
AA8
A
134 137Right-handed 310
Helix 9
AA9
A
140 146Right-handed alpha
Helix 10
AB1
A
148 159Right-handed alpha
Helix 11
AB2
A
169 171Right-handed 310
Helix 12
AB3
A
172 187Right-handed alpha
Helix 13
AB4
A
203 212Right-handed alpha
Helix 14
AB5
A
222 226Right-handed 310
Helix 15
AB6
A
251 257Right-handed alpha
Helix 16
AB7
A
284 299Right-handed alpha
Helix 17
AB8
A
301 305Right-handed 310
Helix 18
AB9
A
315 329Right-handed alpha
Helix 19
AC1
A
339 344Right-handed alpha
Helix 20
AC2
A
346 348Right-handed 310
Helix 21
AC3
A
349 365Right-handed alpha
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There are 3 sheets in PDB entry 6P9M. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
164 165first strand
Strand 2
A
108 114parallel
Strand 3
A
192 198parallel
Strand 4
A
243 250anti-parallel
Strand 5
A
14 22anti-parallel
Strand 6
A
263 272anti-parallel
Strand 7
A
407 414anti-parallel
Strand 8
A
396 403anti-parallel
Strand 9
A
307 309parallel
Strand 10
A
335 337parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
44 45first strand
Strand 2
A
60 61anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
366 367first strand
Strand 2
A
390 391anti-parallel
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