Analysis of interatomic Contacts of Structural Units in PDB entry:
6PCI


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6PCI entry

There are 18 chains in PDB entry 6PCI (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
SER 32ILE 281
H
GLN 1ALA 132
K
ILE 2THR 109
D
GLU 502GLY 598
Q
GLU 1LYS 108
N
GLN 1SER 124
B
SER 32ILE 281
I
GLN 1ALA 132
L
ILE 2THR 109
E
GLU 502GLY 598
R
GLU 1LYS 108
O
GLN 1SER 124
C
SER 32ILE 281
J
GLN 1ALA 132
M
ILE 2THR 109
F
GLU 502GLY 598
S
GLU 1LYS 108
P
GLN 1SER 124
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 39 helices in PDB entry 6PCI. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
59 63Right-handed 310
Helix 2
AA2
A
78 83Right-handed alpha
Helix 3
AA3
A
249 264Right-handed alpha
Helix 4
AA4
H
62 65Right-handed 310
Helix 5
AA5
H
87 91Right-handed 310
Helix 6
AA6
K
79 83Right-handed 310
Helix 7
AA7
D
532 536Right-handed 310
Helix 8
AA8
D
538 541Right-handed 310
Helix 9
AA9
D
553 576Right-handed alpha
Helix 10
AB1
D
583 598Right-handed alpha
Helix 11
AB2
Q
80 84Right-handed 310
Helix 12
AB3
N
61 64Right-handed 310
Helix 13
AB4
N
86 90Right-handed 310
Helix 14
AB5
B
59 63Right-handed 310
Helix 15
AB6
B
78 83Right-handed alpha
Helix 16
AB7
B
249 264Right-handed alpha
Helix 17
AB8
I
62 65Right-handed 310
Helix 18
AB9
I
87 91Right-handed 310
Helix 19
AC1
L
79 83Right-handed 310
Helix 20
AC2
E
532 536Right-handed 310
Helix 21
AC3
E
538 541Right-handed 310
Helix 22
AC4
E
553 576Right-handed alpha
Helix 23
AC5
E
583 598Right-handed alpha
Helix 24
AC6
R
80 84Right-handed 310
Helix 25
AC7
O
61 64Right-handed 310
Helix 26
AC8
O
86 90Right-handed 310
Helix 27
AC9
C
59 63Right-handed 310
Helix 28
AD1
C
78 83Right-handed alpha
Helix 29
AD2
C
249 264Right-handed alpha
Helix 30
AD3
J
62 65Right-handed 310
Helix 31
AD4
J
87 91Right-handed 310
Helix 32
AD5
M
79 83Right-handed 310
Helix 33
AD6
F
532 536Right-handed 310
Helix 34
AD7
F
538 541Right-handed 310
Helix 35
AD8
F
553 576Right-handed alpha
Helix 36
AD9
F
583 598Right-handed alpha
Helix 37
AE1
S
80 84Right-handed 310
Helix 38
AE2
P
61 64Right-handed 310
Helix 39
AE3
P
86 90Right-handed 310
Back to top of page

There are 51 sheets in PDB entry 6PCI. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1, AF2, AF3, AF4, AF5, AF6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
36 38first strand
Strand 2
A
43 45anti-parallel
Back to list of sheets
Back to top of page

There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
543 548first strand
Strand 2
D
515 520anti-parallel
Strand 3
A
101 103anti-parallel
Strand 4
A
65 69parallel
Strand 5
A
177 183anti-parallel
Strand 6
A
159 162anti-parallel
Strand 7
A
165 167anti-parallel
Strand 8
A
96 98anti-parallel
Strand 9
D
580 581parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
86 89first strand
Strand 2
A
151 154anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
107 114first strand
Strand 2
A
137 144parallel
Strand 3
A
216 223parallel
Strand 4
A
231 233anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
240 242first strand
Strand 2
A
272 275parallel
Strand 3
H
112 115anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
3 5first strand
Strand 2
H
17 25anti-parallel
Strand 3
H
78 84anti-parallel
Strand 4
H
68 69anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
3 5first strand
Strand 2
H
17 25anti-parallel
Strand 3
H
78 84anti-parallel
Strand 4
H
72 73anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
10 12first strand
Strand 2
H
125 129parallel
Strand 3
H
92 100anti-parallel
Strand 4
H
34 39anti-parallel
Strand 5
H
45 51anti-parallel
Strand 6
H
58 60anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
10 12first strand
Strand 2
H
125 129parallel
Strand 3
H
92 100anti-parallel
Strand 4
H
117 121anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
K
4 7first strand
Strand 2
K
19 25anti-parallel
Strand 3
K
70 75anti-parallel
Strand 4
K
62 63anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
K
4 7first strand
Strand 2
K
19 25anti-parallel
Strand 3
K
70 75anti-parallel
Strand 4
K
66 67anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
K
12 14first strand
Strand 2
K
102 107parallel
Strand 3
K
84 90anti-parallel
Strand 4
K
33 38anti-parallel
Strand 5
K
45 49anti-parallel
Strand 6
K
53 54anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
Q
4 7first strand
Strand 2
Q
18 25anti-parallel
Strand 3
Q
71 77anti-parallel
Strand 4
Q
63 64anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
Q
10 13first strand
Strand 2
Q
103 107parallel
Strand 3
Q
85 93anti-parallel
Strand 4
Q
34 39anti-parallel
Strand 5
Q
45 50anti-parallel
Strand 6
Q
54 55anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
Q
10 13first strand
Strand 2
Q
103 107parallel
Strand 3
Q
85 93anti-parallel
Strand 4
Q
96 99anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
N
3 7first strand
Strand 2
N
18 25anti-parallel
Strand 3
N
77 82anti-parallel
Strand 4
N
67 72anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
N
57 59first strand
Strand 2
N
46 52anti-parallel
Strand 3
N
33 39anti-parallel
Strand 4
N
91 94anti-parallel
Strand 5
N
118 120anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
36 38first strand
Strand 2
B
43 45anti-parallel
Back to list of sheets
Back to top of page

There are 9 strands in AC1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
543 548first strand
Strand 2
E
515 520anti-parallel
Strand 3
B
101 103anti-parallel
Strand 4
B
65 69parallel
Strand 5
B
177 183anti-parallel
Strand 6
B
159 162anti-parallel
Strand 7
B
165 167anti-parallel
Strand 8
B
96 98anti-parallel
Strand 9
E
580 581parallel
Back to list of sheets
Back to top of page

There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
86 89first strand
Strand 2
B
151 154anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
107 114first strand
Strand 2
B
137 144parallel
Strand 3
B
216 223parallel
Strand 4
B
231 233anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
240 242first strand
Strand 2
B
272 275parallel
Strand 3
I
112 115anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
3 5first strand
Strand 2
I
17 25anti-parallel
Strand 3
I
78 84anti-parallel
Strand 4
I
68 69anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
3 5first strand
Strand 2
I
17 25anti-parallel
Strand 3
I
78 84anti-parallel
Strand 4
I
72 73anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in AC7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
10 12first strand
Strand 2
I
125 129parallel
Strand 3
I
92 100anti-parallel
Strand 4
I
34 39anti-parallel
Strand 5
I
45 51anti-parallel
Strand 6
I
58 60anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
10 12first strand
Strand 2
I
125 129parallel
Strand 3
I
92 100anti-parallel
Strand 4
I
117 121anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
L
4 7first strand
Strand 2
L
19 25anti-parallel
Strand 3
L
70 75anti-parallel
Strand 4
L
62 63anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AD1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
L
4 7first strand
Strand 2
L
19 25anti-parallel
Strand 3
L
70 75anti-parallel
Strand 4
L
66 67anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in AD2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
L
12 14first strand
Strand 2
L
102 107parallel
Strand 3
L
84 90anti-parallel
Strand 4
L
33 38anti-parallel
Strand 5
L
45 49anti-parallel
Strand 6
L
53 54anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AD3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
R
4 7first strand
Strand 2
R
18 25anti-parallel
Strand 3
R
71 77anti-parallel
Strand 4
R
63 64anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in AD4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
R
10 13first strand
Strand 2
R
103 107parallel
Strand 3
R
85 93anti-parallel
Strand 4
R
34 39anti-parallel
Strand 5
R
45 50anti-parallel
Strand 6
R
54 55anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AD5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
R
10 13first strand
Strand 2
R
103 107parallel
Strand 3
R
85 93anti-parallel
Strand 4
R
96 99anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AD6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
O
3 7first strand
Strand 2
O
18 25anti-parallel
Strand 3
O
77 82anti-parallel
Strand 4
O
67 72anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AD7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
O
57 59first strand
Strand 2
O
46 52anti-parallel
Strand 3
O
33 39anti-parallel
Strand 4
O
91 94anti-parallel
Strand 5
O
118 120anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AD8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
36 38first strand
Strand 2
C
43 45anti-parallel
Back to list of sheets
Back to top of page

There are 9 strands in AD9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
543 548first strand
Strand 2
F
515 520anti-parallel
Strand 3
C
101 103anti-parallel
Strand 4
C
65 69parallel
Strand 5
C
177 183anti-parallel
Strand 6
C
159 162anti-parallel
Strand 7
C
165 167anti-parallel
Strand 8
C
96 98anti-parallel
Strand 9
F
580 581parallel
Back to list of sheets
Back to top of page

There are 2 strands in AE1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
86 89first strand
Strand 2
C
151 154anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AE2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
107 114first strand
Strand 2
C
137 144parallel
Strand 3
C
216 223parallel
Strand 4
C
231 233anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AE3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
240 242first strand
Strand 2
C
272 275parallel
Strand 3
J
112 115anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AE4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
J
3 5first strand
Strand 2
J
17 25anti-parallel
Strand 3
J
78 84anti-parallel
Strand 4
J
68 69anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AE5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
J
3 5first strand
Strand 2
J
17 25anti-parallel
Strand 3
J
78 84anti-parallel
Strand 4
J
72 73anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in AE6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
J
10 12first strand
Strand 2
J
125 129parallel
Strand 3
J
92 100anti-parallel
Strand 4
J
34 39anti-parallel
Strand 5
J
45 51anti-parallel
Strand 6
J
58 60anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AE7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
J
10 12first strand
Strand 2
J
125 129parallel
Strand 3
J
92 100anti-parallel
Strand 4
J
117 121anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AE8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
M
4 7first strand
Strand 2
M
19 25anti-parallel
Strand 3
M
70 75anti-parallel
Strand 4
M
62 63anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AE9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
M
4 7first strand
Strand 2
M
19 25anti-parallel
Strand 3
M
70 75anti-parallel
Strand 4
M
66 67anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in AF1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
M
12 14first strand
Strand 2
M
102 107parallel
Strand 3
M
84 90anti-parallel
Strand 4
M
33 38anti-parallel
Strand 5
M
45 49anti-parallel
Strand 6
M
53 54anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AF2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
S
4 7first strand
Strand 2
S
18 25anti-parallel
Strand 3
S
71 77anti-parallel
Strand 4
S
63 64anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in AF3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
S
10 13first strand
Strand 2
S
103 107parallel
Strand 3
S
85 93anti-parallel
Strand 4
S
34 39anti-parallel
Strand 5
S
45 50anti-parallel
Strand 6
S
54 55anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AF4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
S
10 13first strand
Strand 2
S
103 107parallel
Strand 3
S
85 93anti-parallel
Strand 4
S
96 99anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AF5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
P
3 7first strand
Strand 2
P
18 25anti-parallel
Strand 3
P
77 82anti-parallel
Strand 4
P
67 72anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AF6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
P
57 59first strand
Strand 2
P
46 52anti-parallel
Strand 3
P
33 39anti-parallel
Strand 4
P
91 94anti-parallel
Strand 5
P
118 120anti-parallel
Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il