Analysis of interatomic Contacts of Structural Units in PDB entry:
6PE0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6PE0 entry

There are 7 chains in PDB entry 6PE0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
F
 ASP 86GLN 342
A
 ARG 48PRO 355
B
 GLU 44ALA 345
C
 GLU 44ILE 361
D
 ASP 42ASP 356
E
 GLU 44GLN 342
G
 UNK 1UNK 10
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 85 helices in PDB entry 6PE0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
F
92 98Right-handed 310
Helix 2
AA2
F
109 113Right-handed 310
Helix 3
AA3
F
117 127Right-handed alpha
Helix 4
AA4
F
133 137Right-handed 310
Helix 5
AA5
F
158 171Right-handed alpha
Helix 6
AA6
F
179 184Right-handed 310
Helix 7
AA7
F
189 205Right-handed alpha
Helix 8
AA8
F
232 242Right-handed alpha
Helix 9
AA9
F
269 274Right-handed alpha
Helix 10
AB1
F
288 298Right-handed alpha
Helix 11
AB2
F
311 316Right-handed alpha
Helix 12
AB3
F
322 327Right-handed alpha
Helix 13
AB4
F
336 342Right-handed alpha
Helix 14
AB5
A
49 64Right-handed alpha
Helix 15
AB6
A
95 100Right-handed 310
Helix 16
AB7
A
118 127Right-handed alpha
Helix 17
AB8
A
127 132Right-handed alpha
Helix 18
AB9
A
159 170Right-handed alpha
Helix 19
AC1
A
179 183Right-handed 310
Helix 20
AC2
A
192 205Right-handed alpha
Helix 21
AC3
A
214 219Right-handed alpha
Helix 22
AC4
A
230 240Right-handed alpha
Helix 23
AC5
A
269 276Right-handed alpha
Helix 24
AC6
A
286 298Right-handed alpha
Helix 25
AC7
A
308 313Right-handed alpha
Helix 26
AC8
A
320 344Right-handed alpha
Helix 27
AC9
B
45 65Right-handed alpha
Helix 28
AD1
B
95 100Right-handed 310
Helix 29
AD2
B
117 127Right-handed alpha
Helix 30
AD3
B
127 132Right-handed alpha
Helix 31
AD4
B
134 138Right-handed 310
Helix 32
AD5
B
160 171Right-handed alpha
Helix 33
AD6
B
189 205Right-handed alpha
Helix 34
AD7
B
227 243Right-handed alpha
Helix 35
AD8
B
271 276Right-handed alpha
Helix 36
AD9
B
286 297Right-handed alpha
Helix 37
AE1
B
308 316Right-handed alpha
Helix 38
AE2
B
322 339Right-handed alpha
Helix 39
AE3
B
340 345Right-handed alpha
Helix 40
AE4
C
45 64Right-handed alpha
Helix 41
AE5
C
91 96Right-handed alpha
Helix 42
AE6
C
97 100Right-handed 310
Helix 43
AE7
C
102 106Right-handed 310
Helix 44
AE8
C
117 127Right-handed alpha
Helix 45
AE9
C
127 132Right-handed alpha
Helix 46
AF1
C
134 138Right-handed 310
Helix 47
AF2
C
159 171Right-handed alpha
Helix 48
AF3
C
179 183Right-handed 310
Helix 49
AF4
C
190 203Right-handed alpha
Helix 50
AF5
C
229 242Right-handed alpha
Helix 51
AF6
C
264 268Right-handed 310
Helix 52
AF7
C
269 274Right-handed alpha
Helix 53
AF8
C
286 298Right-handed alpha
Helix 54
AF9
C
308 316Right-handed alpha
Helix 55
AG1
C
320 333Right-handed alpha
Helix 56
AG2
C
333 344Right-handed alpha
Helix 57
AG3
D
43 64Right-handed alpha
Helix 58
AG4
D
92 98Right-handed alpha
Helix 59
AG5
D
109 113Right-handed 310
Helix 60
AG6
D
116 125Right-handed alpha
Helix 61
AG7
D
133 137Right-handed 310
Helix 62
AG8
D
159 170Right-handed alpha
Helix 63
AG9
D
179 183Right-handed 310
Helix 64
AH1
D
190 205Right-handed alpha
Helix 65
AH2
D
228 238Right-handed alpha
Helix 66
AH3
D
289 298Right-handed alpha
Helix 67
AH4
D
308 317Right-handed alpha
Helix 68
AH5
D
320 341Right-handed alpha
Helix 69
AH6
E
45 64Right-handed alpha
Helix 70
AH7
E
92 97Right-handed alpha
Helix 71
AH8
E
98 100Right-handed 310
Helix 72
AH9
E
117 126Right-handed alpha
Helix 73
AI1
E
127 132Right-handed alpha
Helix 74
AI2
E
133 139Right-handed 310
Helix 75
AI3
E
159 170Right-handed alpha
Helix 76
AI4
E
179 184Right-handed alpha
Helix 77
AI5
E
189 205Right-handed alpha
Helix 78
AI6
E
214 219Right-handed alpha
Helix 79
AI7
E
227 232Right-handed alpha
Helix 80
AI8
E
232 242Right-handed alpha
Helix 81
AI9
E
286 298Right-handed alpha
Helix 82
AJ1
E
308 316Right-handed alpha
Helix 83
AJ2
E
320 332Right-handed alpha
Helix 84
AJ3
E
333 339Right-handed alpha
Helix 85
AJ4
E
340 342Right-handed 310
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There are 7 sheets in PDB entry 6PE0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
100 101first strand
Strand 2
F
175 177anti-parallel
Strand 3
F
209 212parallel
Strand 4
F
258 262parallel
Strand 5
F
149 153parallel
Strand 6
F
278 281parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
259 260first strand
Strand 2
A
150 152parallel
Strand 3
A
278 280parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
174 175first strand
Strand 2
A
208 209parallel
Strand 3
A
256 257parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
174 178first strand
Strand 2
B
208 212parallel
Strand 3
B
257 260parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
175 177first strand
Strand 2
C
208 213parallel
Strand 3
C
256 261parallel
Strand 4
C
149 153parallel
Strand 5
C
278 281parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
174 177first strand
Strand 2
D
208 213parallel
Strand 3
D
256 262parallel
Strand 4
D
150 153parallel
Strand 5
D
278 281parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
176 177first strand
Strand 2
E
209 212parallel
Strand 3
E
257 262parallel
Strand 4
E
149 153parallel
Strand 5
E
278 281parallel
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