Analysis of interatomic Contacts of Structural Units in PDB entry:
6PE3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6PE3 entry

There is 1 chain in PDB entry 6PE3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1TYR 385
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 6PE3. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
14 22Right-handed alpha
Helix 2
AA2
A
22 29Right-handed alpha
Helix 3
AA3
A
38 41Right-handed 310
Helix 4
AA4
A
71 89Right-handed alpha
Helix 5
AA5
A
105 110Right-handed 310
Helix 6
AA6
A
139 141Right-handed 310
Helix 7
AA7
A
162 186Right-handed alpha
Helix 8
AA8
A
195 198Right-handed 310
Helix 9
AA9
A
201 213Right-handed alpha
Helix 10
AB1
A
254 275Right-handed alpha
Helix 11
AB2
A
294 304Right-handed alpha
Helix 12
AB3
A
313 315Right-handed 310
Helix 13
AB4
A
322 337Right-handed alpha
Helix 14
AB5
A
375 384Right-handed alpha
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There are 4 sheets in PDB entry 6PE3. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
31 36first strand
Strand 2
A
47 56anti-parallel
Strand 3
A
59 68anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
96 97first strand
Strand 2
A
122 127anti-parallel
Strand 3
A
132 137anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
96 97first strand
Strand 2
A
122 127anti-parallel
Strand 3
A
343 346anti-parallel
Strand 4
A
353 358anti-parallel
Strand 5
A
157 160anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
248 251first strand
Strand 2
A
230 237anti-parallel
Strand 3
A
215 221anti-parallel
Strand 4
A
191 194anti-parallel
Strand 5
A
308 311parallel
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