Analysis of interatomic Contacts of Structural Units in PDB entry:
6PEH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6PEH entry

There are 4 chains in PDB entry 6PEH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
H
 SER 3THR 212
L
 ILE 2ASP 210
A
 SER 3CYS 213
B
 ALA 1ILE 29
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 6PEH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
H
83 87Right-handed 310
Helix 2
AA2
H
156 158Right-handed 310
Helix 3
AA3
H
198 201Right-handed 310
Helix 4
AA4
L
79 83Right-handed 310
Helix 5
AA5
L
124 127Right-handed 310
Helix 6
AA6
L
182 188Right-handed alpha
Helix 7
AA7
A
83 87Right-handed 310
Helix 8
AA8
A
156 158Right-handed 310
Helix 9
AA9
A
185 189Right-handed 310
Helix 10
AB1
A
198 201Right-handed 310
Helix 11
AB2
B
79 83Right-handed 310
Helix 12
AB3
B
124 127Right-handed 310
Helix 13
AB4
B
182 187Right-handed alpha
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There are 20 sheets in PDB entry 6PEH. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
3 7first strand
Strand 2
H
18 25anti-parallel
Strand 3
H
76 81anti-parallel
Strand 4
H
67 71anti-parallel
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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
53 54first strand
Strand 2
L
45 49anti-parallel
Strand 3
L
34 38anti-parallel
Strand 4
L
85 93anti-parallel
Strand 5
H
100 103anti-parallel
Strand 6
H
88 99anti-parallel
Strand 7
H
34 39anti-parallel
Strand 8
H
45 52anti-parallel
Strand 9
H
57 59anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
95 98first strand
Strand 2
L
85 93anti-parallel
Strand 3
L
102 107anti-parallel
Strand 4
L
10 14parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
11 12first strand
Strand 2
H
107 111parallel
Strand 3
H
88 99anti-parallel
Strand 4
H
34 39anti-parallel
Strand 5
H
45 52anti-parallel
Strand 6
H
57 59anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
120 124first strand
Strand 2
H
136 145anti-parallel
Strand 3
H
176 184anti-parallel
Strand 4
H
163 165anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
120 124first strand
Strand 2
H
136 145anti-parallel
Strand 3
H
176 184anti-parallel
Strand 4
H
169 170anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
151 154first strand
Strand 2
H
191 197anti-parallel
Strand 3
H
202 208anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
4 5first strand
Strand 2
L
18 25anti-parallel
Strand 3
L
70 76anti-parallel
Strand 4
L
62 67anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
114 118first strand
Strand 2
L
129 139anti-parallel
Strand 3
L
172 181anti-parallel
Strand 4
L
158 162anti-parallel
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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
152 153first strand
Strand 2
L
144 149anti-parallel
Strand 3
L
190 197anti-parallel
Strand 4
L
200 207anti-parallel
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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3 7first strand
Strand 2
A
18 25anti-parallel
Strand 3
A
76 81anti-parallel
Strand 4
A
67 71anti-parallel
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There are 9 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
53 54first strand
Strand 2
B
45 49anti-parallel
Strand 3
B
34 38anti-parallel
Strand 4
B
84 93anti-parallel
Strand 5
A
100 103anti-parallel
Strand 6
A
88 99anti-parallel
Strand 7
A
34 39anti-parallel
Strand 8
A
45 52anti-parallel
Strand 9
A
57 59anti-parallel
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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
95 98first strand
Strand 2
B
84 93anti-parallel
Strand 3
B
102 107anti-parallel
Strand 4
B
10 14parallel
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There are 6 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
11 12first strand
Strand 2
A
107 111parallel
Strand 3
A
88 99anti-parallel
Strand 4
A
34 39anti-parallel
Strand 5
A
45 52anti-parallel
Strand 6
A
57 59anti-parallel
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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
120 124first strand
Strand 2
A
136 145anti-parallel
Strand 3
A
176 184anti-parallel
Strand 4
A
164 165anti-parallel
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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
120 124first strand
Strand 2
A
136 145anti-parallel
Strand 3
A
176 184anti-parallel
Strand 4
A
169 170anti-parallel
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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
151 154first strand
Strand 2
A
191 197anti-parallel
Strand 3
A
202 208anti-parallel
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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
4 7first strand
Strand 2
B
18 25anti-parallel
Strand 3
B
70 76anti-parallel
Strand 4
B
62 67anti-parallel
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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
114 118first strand
Strand 2
B
129 139anti-parallel
Strand 3
B
172 181anti-parallel
Strand 4
B
158 162anti-parallel
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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
152 153first strand
Strand 2
B
144 149anti-parallel
Strand 3
B
190 197anti-parallel
Strand 4
B
200 207anti-parallel
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