Analysis of interatomic Contacts of Structural Units in PDB entry:
6PFJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6PFJ entry

There are 2 chains in PDB entry 6PFJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
T
 LEU 50LEU 198
A
 ALA 25ASP 275
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 6PFJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
T
50 90Right-handed alpha
Helix 2
AA2
T
94 97Right-handed 310
Helix 3
AA3
T
98 104Right-handed alpha
Helix 4
AA4
T
124 135Right-handed alpha
Helix 5
AA5
T
137 146Right-handed 310
Helix 6
AA6
T
147 189Right-handed alpha
Helix 7
AA7
T
193 198Right-handed 310
Helix 8
AA8
A
28 40Right-handed alpha
Helix 9
AA9
A
41 53Right-handed alpha
Helix 10
AB1
A
53 64Right-handed alpha
Helix 11
AB2
A
72 91Right-handed alpha
Helix 12
AB3
A
98 118Right-handed alpha
Helix 13
AB4
A
122 144Right-handed alpha
Helix 14
AB5
A
148 156Right-handed alpha
Helix 15
AB6
A
159 169Right-handed alpha
Helix 16
AB7
A
174 182Right-handed alpha
Helix 17
AB8
A
217 225Right-handed alpha
Helix 18
AB9
A
227 239Right-handed alpha
Helix 19
AC1
A
243 252Right-handed alpha
Helix 20
AC2
A
254 274Right-handed alpha
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There are no sheets in PDB entry 6PFJ
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