Analysis of interatomic Contacts of Structural Units in PDB entry:
6PFV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6PFV entry

There are 4 chains in PDB entry 6PFV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
T
 ALA 36ALA 199
A
 PRO 24ASP 275
B
 ARG 40ALA 199
D
 PRO 24GLU 114
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 63 helices in PDB entry 6PFV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
T
42 48Right-handed 310
Helix 2
AA2
T
49 90Right-handed alpha
Helix 3
AA3
T
94 104Right-handed alpha
Helix 4
AA4
T
124 135Right-handed alpha
Helix 5
AA5
T
137 142Right-handed 310
Helix 6
AA6
T
147 190Right-handed alpha
Helix 7
AA7
T
193 198Right-handed 310
Helix 8
AA8
A
28 40Right-handed alpha
Helix 9
AA9
A
41 53Right-handed alpha
Helix 10
AB1
A
53 65Right-handed alpha
Helix 11
AB2
A
73 90Right-handed alpha
Helix 12
AB3
A
98 118Right-handed alpha
Helix 13
AB4
A
122 144Right-handed alpha
Helix 14
AB5
A
148 156Right-handed alpha
Helix 15
AB6
A
159 170Right-handed alpha
Helix 16
AB7
A
174 181Right-handed alpha
Helix 17
AB8
A
217 224Right-handed alpha
Helix 18
AB9
A
227 239Right-handed alpha
Helix 19
AC1
A
243 252Right-handed alpha
Helix 20
AC2
A
254 271Right-handed alpha
Helix 21
AC3
B
42 46Right-handed 310
Helix 22
AC4
B
49 89Right-handed alpha
Helix 23
AC5
B
98 104Right-handed alpha
Helix 24
AC6
B
124 135Right-handed alpha
Helix 25
AC7
B
137 141Right-handed 310
Helix 26
AC8
B
142 146Right-handed 310
Helix 27
AC9
B
147 190Right-handed alpha
Helix 28
AD1
B
194 198Right-handed 310
Helix 29
AD2
D
28 40Right-handed alpha
Helix 30
AD3
D
41 53Right-handed alpha
Helix 31
AD4
D
53 65Right-handed alpha
Helix 32
AD5
D
72 88Right-handed alpha
Helix 33
AD6
D
98 118Right-handed alpha
Helix 34
AD7
D
122 144Right-handed alpha
Helix 35
AD8
D
148 157Right-handed alpha
Helix 36
AD9
D
159 169Right-handed alpha
Helix 37
AE1
D
174 181Right-handed alpha
Helix 38
AE2
D
217 225Right-handed alpha
Helix 39
AE3
D
227 239Right-handed alpha
Helix 40
AE4
D
243 252Right-handed alpha
Helix 41
AE5
D
254 274Right-handed alpha
Helix 42
AE6
E
43 48Right-handed 310
Helix 43
AE7
E
49 91Right-handed alpha
Helix 44
AE8
E
94 97Right-handed 310
Helix 45
AE9
E
98 104Right-handed alpha
Helix 46
AF1
E
124 135Right-handed alpha
Helix 47
AF2
E
138 142Right-handed 310
Helix 48
AF3
E
147 189Right-handed alpha
Helix 49
AF4
E
195 199Right-handed 310
Helix 50
AF5
G
28 40Right-handed alpha
Helix 51
AF6
G
41 52Right-handed alpha
Helix 52
AF7
G
52 65Right-handed alpha
Helix 53
AF8
G
73 89Right-handed alpha
Helix 54
AF9
G
98 118Right-handed alpha
Helix 55
AG1
G
122 144Right-handed alpha
Helix 56
AG2
G
148 156Right-handed alpha
Helix 57
AG3
G
159 170Right-handed alpha
Helix 58
AG4
G
174 182Right-handed alpha
Helix 59
AG5
G
218 223Right-handed alpha
Helix 60
AG6
G
224 226Right-handed 310
Helix 61
AG7
G
227 239Right-handed alpha
Helix 62
AG8
G
243 252Right-handed alpha
Helix 63
AG9
G
254 273Right-handed alpha
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There are no sheets in PDB entry 6PFV
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