Analysis of interatomic Contacts of Structural Units in PDB entry:
6PHH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6PHH entry

There are 4 chains in PDB entry 6PHH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
C
GLU 1CYS 228
D
ASP 1CYS 217
A
GLU 1CYS 228
B
ASP 1CYS 217
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 6PHH. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
C
28 32Right-handed 310
Helix 2
AA2
C
74 76Right-handed 310
Helix 3
AA3
C
87 91Right-handed 310
Helix 4
AA4
C
168 170Right-handed 310
Helix 5
AA5
C
199 201Right-handed 310
Helix 6
AA6
C
213 216Right-handed 310
Helix 7
AA7
D
83 87Right-handed 310
Helix 8
AA8
D
124 129Right-handed alpha
Helix 9
AA9
D
186 190Right-handed alpha
Helix 10
AB1
A
28 32Right-handed 310
Helix 11
AB2
A
74 76Right-handed 310
Helix 12
AB3
A
87 91Right-handed 310
Helix 13
AB4
A
139 141Right-handed 310
Helix 14
AB5
A
168 170Right-handed 310
Helix 15
AB6
A
199 201Right-handed 310
Helix 16
AB7
A
213 216Right-handed 310
Helix 17
AB8
B
83 87Right-handed 310
Helix 18
AB9
B
124 129Right-handed alpha
Helix 19
AC1
B
186 190Right-handed alpha
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There are 24 sheets in PDB entry 6PHH. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
3 7first strand
Strand 2
C
18 25anti-parallel
Strand 3
C
78 83anti-parallel
Strand 4
C
68 73anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
10 12first strand
Strand 2
C
119 123parallel
Strand 3
C
92 103anti-parallel
Strand 4
C
33 39anti-parallel
Strand 5
C
45 51anti-parallel
Strand 6
C
58 60anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
10 12first strand
Strand 2
C
119 123parallel
Strand 3
C
92 103anti-parallel
Strand 4
C
108 115anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
132 136first strand
Strand 2
C
147 157anti-parallel
Strand 3
C
188 197anti-parallel
Strand 4
C
175 177anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
132 136first strand
Strand 2
C
147 157anti-parallel
Strand 3
C
188 197anti-parallel
Strand 4
C
181 182anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
163 166first strand
Strand 2
C
207 212anti-parallel
Strand 3
C
217 222anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
4 7first strand
Strand 2
D
19 25anti-parallel
Strand 3
D
74 79anti-parallel
Strand 4
D
66 71anti-parallel
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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
10 13first strand
Strand 2
D
105 109parallel
Strand 3
D
88 94anti-parallel
Strand 4
D
37 42anti-parallel
Strand 5
D
49 53anti-parallel
Strand 6
D
57 58anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
10 13first strand
Strand 2
D
105 109parallel
Strand 3
D
88 94anti-parallel
Strand 4
D
100 101anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
30 31first strand
Strand 2
D
34 35anti-parallel
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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
117 121first strand
Strand 2
D
132 142anti-parallel
Strand 3
D
176 185anti-parallel
Strand 4
D
162 166anti-parallel
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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
156 157first strand
Strand 2
D
148 153anti-parallel
Strand 3
D
194 200anti-parallel
Strand 4
D
208 213anti-parallel
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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
3 7first strand
Strand 2
A
18 25anti-parallel
Strand 3
A
78 83anti-parallel
Strand 4
A
68 73anti-parallel
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There are 6 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
10 12first strand
Strand 2
A
119 123parallel
Strand 3
A
92 100anti-parallel
Strand 4
A
33 39anti-parallel
Strand 5
A
45 51anti-parallel
Strand 6
A
58 60anti-parallel
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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
10 12first strand
Strand 2
A
119 123parallel
Strand 3
A
92 100anti-parallel
Strand 4
A
111 115anti-parallel
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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
132 136first strand
Strand 2
A
147 157anti-parallel
Strand 3
A
188 197anti-parallel
Strand 4
A
175 177anti-parallel
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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
143 144first strand
Strand 2
A
147 157anti-parallel
Strand 3
A
188 197anti-parallel
Strand 4
A
181 182anti-parallel
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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
163 166first strand
Strand 2
A
207 212anti-parallel
Strand 3
A
217 222anti-parallel
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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
4 7first strand
Strand 2
B
19 25anti-parallel
Strand 3
B
74 79anti-parallel
Strand 4
B
66 71anti-parallel
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There are 6 strands in AC2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
10 13first strand
Strand 2
B
105 109parallel
Strand 3
B
88 94anti-parallel
Strand 4
B
37 42anti-parallel
Strand 5
B
49 53anti-parallel
Strand 6
B
57 58anti-parallel
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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
10 13first strand
Strand 2
B
105 109parallel
Strand 3
B
88 94anti-parallel
Strand 4
B
100 101anti-parallel
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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
30 31first strand
Strand 2
B
34 35anti-parallel
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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
117 121first strand
Strand 2
B
132 142anti-parallel
Strand 3
B
176 185anti-parallel
Strand 4
B
162 166anti-parallel
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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
156 157first strand
Strand 2
B
148 153anti-parallel
Strand 3
B
194 200anti-parallel
Strand 4
B
208 213anti-parallel
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