Analysis of interatomic Contacts of Structural Units in PDB entry:
6PI9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6PI9 entry

There is 1 chain in PDB entry 6PI9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 0THR 259
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 6PI9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 14Right-handed alpha
Helix 2
AA2
A
15 19Right-handed 310
Helix 3
AA3
A
22 34Right-handed alpha
Helix 4
AA4
A
35 37Right-handed 310
Helix 5
AA5
A
39 55Right-handed alpha
Helix 6
AA6
A
56 59Right-handed 310
Helix 7
AA7
A
61 75Right-handed alpha
Helix 8
AA8
A
81 87Right-handed alpha
Helix 9
AA9
A
89 96Right-handed alpha
Helix 10
AB1
A
98 111Right-handed alpha
Helix 11
AB2
A
123 131Right-handed alpha
Helix 12
AB3
A
142 157Right-handed alpha
Helix 13
AB4
A
184 192Right-handed alpha
Helix 14
AB5
A
194 203Right-handed alpha
Helix 15
AB6
A
223 236Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 6PI9.

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
161 164first strand
Strand 2
A
136 140parallel
Strand 3
A
116 119parallel
Strand 4
A
178 182parallel
Strand 5
A
207 213parallel
Strand 6
A
251 258anti-parallel
Strand 7
A
240 247anti-parallel
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