Analysis of interatomic Contacts of Structural Units in PDB entry:
6PIG

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6PIG entry

There are 11 chains in PDB entry 6PIG (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
1	C 1	G 60
A	LYS 2	ASP 352
B	LYS 2	LYS 350
C	LYS 2	HIS 349
D	LYS 2	HIS 349
E	LYS 2	HIS 349
F	LYS 2	HIS 349
G	LEU 4	ASN 631
H	LYS 2	LEU 198
I	MET 1	TRP 394
J	MET 1	ARG 393

There are 96 helices in PDB entry 6PIG. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	105	123	Right-handed alpha
Helix 2	AA2	A	125	134	Right-handed alpha
Helix 3	AA3	A	177	182	Right-handed alpha
Helix 4	AA4	A	186	200	Right-handed alpha
Helix 5	AA5	A	261	268	Right-handed alpha
Helix 6	AA6	A	309	313	Right-handed 310
Helix 7	AA7	A	316	321	Right-handed alpha
Helix 8	AA8	A	328	342	Right-handed alpha
Helix 9	AA9	B	107	123	Right-handed alpha
Helix 10	AB1	B	125	134	Right-handed alpha
Helix 11	AB2	B	139	143	Right-handed 310
Helix 12	AB3	B	177	182	Right-handed alpha
Helix 13	AB4	B	186	191	Right-handed alpha
Helix 14	AB5	B	194	200	Right-handed alpha
Helix 15	AB6	B	305	311	Right-handed alpha
Helix 16	AB7	B	312	322	Right-handed alpha
Helix 17	AB8	B	329	344	Right-handed alpha
Helix 18	AB9	C	45	49	Right-handed 310
Helix 19	AC1	C	107	123	Right-handed alpha
Helix 20	AC2	C	125	135	Right-handed alpha
Helix 21	AC3	C	139	143	Right-handed 310
Helix 22	AC4	C	178	182	Right-handed 310
Helix 23	AC5	C	187	192	Right-handed alpha
Helix 24	AC6	C	264	269	Right-handed alpha
Helix 25	AC7	C	305	311	Right-handed alpha
Helix 26	AC8	C	312	320	Right-handed alpha
Helix 27	AC9	C	330	343	Right-handed alpha
Helix 28	AD1	D	107	123	Right-handed alpha
Helix 29	AD2	D	125	138	Right-handed alpha
Helix 30	AD3	D	177	182	Right-handed alpha
Helix 31	AD4	D	194	199	Right-handed alpha
Helix 32	AD5	D	262	269	Right-handed alpha
Helix 33	AD6	D	305	311	Right-handed alpha
Helix 34	AD7	D	312	320	Right-handed alpha
Helix 35	AD8	D	330	343	Right-handed alpha
Helix 36	AD9	E	45	49	Right-handed 310
Helix 37	AE1	E	63	67	Right-handed 310
Helix 38	AE2	E	108	123	Right-handed alpha
Helix 39	AE3	E	125	137	Right-handed alpha
Helix 40	AE4	E	194	200	Right-handed alpha
Helix 41	AE5	E	305	311	Right-handed alpha
Helix 42	AE6	E	312	320	Right-handed alpha
Helix 43	AE7	E	330	344	Right-handed alpha
Helix 44	AE8	F	107	123	Right-handed alpha
Helix 45	AE9	F	125	135	Right-handed alpha
Helix 46	AF1	F	139	143	Right-handed 310
Helix 47	AF2	F	177	182	Right-handed alpha
Helix 48	AF3	F	183	188	Right-handed alpha
Helix 49	AF4	F	194	200	Right-handed alpha
Helix 50	AF5	F	307	312	Right-handed alpha
Helix 51	AF6	F	312	320	Right-handed alpha
Helix 52	AF7	F	330	342	Right-handed alpha
Helix 53	AF8	G	6	10	Right-handed 310
Helix 54	AF9	G	17	24	Right-handed alpha
Helix 55	AG1	G	36	44	Right-handed alpha
Helix 56	AG2	G	63	68	Right-handed alpha
Helix 57	AG3	G	71	77	Right-handed alpha
Helix 58	AG4	G	112	116	Right-handed 310
Helix 59	AG5	G	148	153	Right-handed alpha
Helix 60	AG6	G	161	167	Right-handed alpha
Helix 61	AG7	G	173	181	Right-handed alpha
Helix 62	AG8	G	219	229	Right-handed alpha
Helix 63	AG9	G	248	253	Right-handed alpha
Helix 64	AH1	G	411	427	Right-handed alpha
Helix 65	AH2	G	494	499	Right-handed alpha
Helix 66	AH3	G	524	529	Right-handed alpha
Helix 67	AH4	G	550	557	Right-handed alpha
Helix 68	AH5	H	16	31	Right-handed alpha
Helix 69	AH6	H	63	70	Right-handed alpha
Helix 70	AH7	H	73	80	Right-handed alpha
Helix 71	AH8	H	106	110	Right-handed 310
Helix 72	AH9	H	111	125	Right-handed alpha
Helix 73	AI1	H	126	128	Right-handed 310
Helix 74	AI2	I	16	21	Right-handed alpha
Helix 75	AI3	I	30	45	Right-handed alpha
Helix 76	AI4	I	68	81	Right-handed alpha
Helix 77	AI5	I	196	201	Right-handed alpha
Helix 78	AI6	I	216	228	Right-handed alpha
Helix 79	AI7	I	246	265	Right-handed alpha
Helix 80	AI8	I	280	285	Right-handed alpha
Helix 81	AI9	I	297	310	Right-handed alpha
Helix 82	AJ1	I	327	333	Right-handed alpha
Helix 83	AJ2	I	336	345	Right-handed alpha
Helix 84	AJ3	I	368	379	Right-handed alpha
Helix 85	AJ4	J	15	24	Right-handed alpha
Helix 86	AJ5	J	32	43	Right-handed alpha
Helix 87	AJ6	J	68	81	Right-handed alpha
Helix 88	AJ7	J	196	206	Right-handed alpha
Helix 89	AJ8	J	217	231	Right-handed alpha
Helix 90	AJ9	J	237	244	Right-handed alpha
Helix 91	AK1	J	246	260	Right-handed alpha
Helix 92	AK2	J	280	285	Right-handed alpha
Helix 93	AK3	J	297	310	Right-handed alpha
Helix 94	AK4	J	328	333	Right-handed alpha
Helix 95	AK5	J	338	345	Right-handed alpha
Helix 96	AK6	J	369	380	Right-handed alpha

There are 36 sheets in PDB entry 6PIG. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	29	31	first strand
Strand 2	A	19	23	anti-parallel
Strand 3	A	84	94	anti-parallel
Strand 4	A	204	214	anti-parallel
Strand 5	A	151	159	anti-parallel
Strand 6	A	166	168	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	35	41	first strand
Strand 2	A	69	75	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	248	251	first strand
Strand 2	A	254	257	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	270	272	first strand
Strand 2	A	282	283	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	289	290	first strand
Strand 2	A	295	296	anti-parallel

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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	29	31	first strand
Strand 2	B	19	23	anti-parallel
Strand 3	B	84	94	anti-parallel
Strand 4	B	204	214	anti-parallel
Strand 5	B	151	159	anti-parallel
Strand 6	B	166	168	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	34	41	first strand
Strand 2	B	69	76	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	248	251	first strand
Strand 2	B	254	257	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	13	15	first strand
Strand 2	C	84	94	anti-parallel
Strand 3	C	19	23	anti-parallel
Strand 4	C	29	31	anti-parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	13	15	first strand
Strand 2	C	84	94	anti-parallel
Strand 3	C	204	214	anti-parallel
Strand 4	C	151	157	anti-parallel
Strand 5	C	166	168	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	35	41	first strand
Strand 2	C	69	75	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	248	251	first strand
Strand 2	C	254	257	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	13	14	first strand
Strand 2	D	84	94	anti-parallel
Strand 3	D	19	23	anti-parallel
Strand 4	D	29	31	anti-parallel

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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	13	14	first strand
Strand 2	D	84	94	anti-parallel
Strand 3	D	204	214	anti-parallel
Strand 4	D	151	157	anti-parallel
Strand 5	D	166	168	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	35	41	first strand
Strand 2	D	69	75	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	248	251	first strand
Strand 2	D	254	257	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	270	272	first strand
Strand 2	D	282	283	anti-parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	13	14	first strand
Strand 2	E	84	94	anti-parallel
Strand 3	E	19	23	anti-parallel
Strand 4	E	29	31	anti-parallel

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There are 5 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	13	14	first strand
Strand 2	E	84	94	anti-parallel
Strand 3	E	204	214	anti-parallel
Strand 4	E	151	159	anti-parallel
Strand 5	E	166	168	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	35	41	first strand
Strand 2	E	69	75	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	248	251	first strand
Strand 2	E	254	257	anti-parallel

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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	13	14	first strand
Strand 2	F	84	94	anti-parallel
Strand 3	F	19	23	anti-parallel
Strand 4	F	29	31	anti-parallel

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There are 5 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	13	14	first strand
Strand 2	F	84	94	anti-parallel
Strand 3	F	204	213	anti-parallel
Strand 4	F	152	159	anti-parallel
Strand 5	F	166	168	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	35	38	first strand
Strand 2	F	72	75	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	248	251	first strand
Strand 2	F	254	257	anti-parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	85	86	first strand
Strand 2	G	217	218	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	201	204	first strand
Strand 2	G	210	213	anti-parallel

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There are 4 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	438	444	first strand
Strand 2	G	478	484	anti-parallel
Strand 3	G	387	394	anti-parallel
Strand 4	G	521	522	anti-parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	398	399	first strand
Strand 2	G	474	475	anti-parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	539	541	first strand
Strand 2	G	599	601	anti-parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	569	572	first strand
Strand 2	G	591	594	anti-parallel

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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	615	616	first strand
Strand 2	G	625	626	anti-parallel

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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	4	5	first strand
Strand 2	H	90	91	anti-parallel

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There are 3 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	55	56	first strand
Strand 2	H	8	10	anti-parallel
Strand 3	H	84	86	anti-parallel

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There are 2 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	99	100	first strand
Strand 2	H	170	171	anti-parallel

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There are 2 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	322	324	first strand
Strand 2	J	365	368	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6PIG

Analysis of interatomic Contacts of Structural Units in PDB entry:
6PIG