Analysis of interatomic Contacts of Structural Units in PDB entry:
6PLJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6PLJ entry

There is 1 chain in PDB entry 6PLJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 2ASN 217
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 6PLJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
15 25Right-handed alpha
Helix 2
AA2
A
31 34Right-handed 310
Helix 3
AA3
A
42 53Right-handed alpha
Helix 4
AA4
A
65 73Right-handed alpha
Helix 5
AA5
A
89 101Right-handed alpha
Helix 6
AA6
A
117 128Right-handed alpha
Helix 7
AA7
A
158 165Right-handed alpha
Helix 8
AA8
A
171 182Right-handed alpha
Helix 9
AA9
A
193 198Right-handed 310
Helix 10
AB1
A
202 217Right-handed alpha
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There are 2 sheets in PDB entry 6PLJ. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
79 82first strand
Strand 2
A
57 62parallel
Strand 3
A
5 11parallel
Strand 4
A
105 110parallel
Strand 5
A
154 157anti-parallel
Strand 6
A
132 137anti-parallel
Strand 7
A
185 190parallel
Strand 8
A
142 143anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
36 37first strand
Strand 2
A
40 41anti-parallel
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