Analysis of interatomic Contacts of Structural Units in PDB entry:
6PQC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6PQC entry

There is 1 chain in PDB entry 6PQC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 59VAL 310
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 6PQC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
65 70Right-handed 310
Helix 2
AA2
A
90 95Right-handed alpha
Helix 3
AA3
A
100 103Right-handed 310
Helix 4
AA4
A
104 115Right-handed alpha
Helix 5
AA5
A
134 138Right-handed 310
Helix 6
AA6
A
142 150Right-handed alpha
Helix 7
AA7
A
151 160Right-handed alpha
Helix 8
AA8
A
163 175Right-handed alpha
Helix 9
AA9
A
187 191Right-handed 310
Helix 10
AB1
A
207 220Right-handed alpha
Helix 11
AB2
A
226 237Right-handed alpha
Helix 12
AB3
A
292 308Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 6PQC.

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
60 62first strand
Strand 2
A
85 89parallel
Strand 3
A
74 80anti-parallel
Strand 4
A
276 284anti-parallel
Strand 5
A
262 273anti-parallel
Strand 6
A
247 257anti-parallel
Strand 7
A
238 239anti-parallel
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