Analysis of interatomic Contacts of Structural Units in PDB entry:
6PR5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6PR5 entry

There are 8 chains in PDB entry 6PR5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 21ASP 500
E
 SER 21ASP 500
B
 T 3 A 18
C
 C 17 A 32
D
 T 1 A 30
F
 T 1 C 9
G
 C 17 A 32
H
 T 1 A 37
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 42 helices in PDB entry 6PR5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
25 36Right-handed alpha
Helix 2
AA2
A
39 53Right-handed alpha
Helix 3
AA3
A
61 69Right-handed alpha
Helix 4
AA4
A
70 73Right-handed 310
Helix 5
AA5
A
89 102Right-handed alpha
Helix 6
AA6
A
186 203Right-handed alpha
Helix 7
AA7
A
224 232Right-handed alpha
Helix 8
AA8
A
252 258Right-handed alpha
Helix 9
AA9
A
264 268Right-handed 310
Helix 10
AB1
A
271 289Right-handed alpha
Helix 11
AB2
A
301 322Right-handed alpha
Helix 12
AB3
A
337 345Right-handed alpha
Helix 13
AB4
A
347 356Right-handed alpha
Helix 14
AB5
A
358 374Right-handed alpha
Helix 15
AB6
A
379 398Right-handed alpha
Helix 16
AB7
A
404 412Right-handed alpha
Helix 17
AB8
A
413 421Right-handed alpha
Helix 18
AB9
A
431 446Right-handed alpha
Helix 19
AC1
A
453 469Right-handed alpha
Helix 20
AC2
A
470 476Right-handed alpha
Helix 21
AC3
A
489 495Right-handed alpha
Helix 22
AC4
E
25 36Right-handed alpha
Helix 23
AC5
E
39 52Right-handed alpha
Helix 24
AC6
E
61 69Right-handed alpha
Helix 25
AC7
E
89 102Right-handed alpha
Helix 26
AC8
E
186 203Right-handed alpha
Helix 27
AC9
E
224 232Right-handed alpha
Helix 28
AD1
E
246 251Right-handed 310
Helix 29
AD2
E
253 258Right-handed alpha
Helix 30
AD3
E
264 268Right-handed 310
Helix 31
AD4
E
271 289Right-handed alpha
Helix 32
AD5
E
301 322Right-handed alpha
Helix 33
AD6
E
337 347Right-handed alpha
Helix 34
AD7
E
347 356Right-handed alpha
Helix 35
AD8
E
358 374Right-handed alpha
Helix 36
AD9
E
379 398Right-handed alpha
Helix 37
AE1
E
404 412Right-handed alpha
Helix 38
AE2
E
413 421Right-handed alpha
Helix 39
AE3
E
431 448Right-handed alpha
Helix 40
AE4
E
453 469Right-handed alpha
Helix 41
AE5
E
470 476Right-handed alpha
Helix 42
AE6
E
491 495Right-handed alpha
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There are 7 sheets in PDB entry 6PR5. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
79 81first strand
Strand 2
A
85 88anti-parallel
Strand 3
A
176 181anti-parallel
Strand 4
A
146 158anti-parallel
Strand 5
A
161 165anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
79 81first strand
Strand 2
A
85 88anti-parallel
Strand 3
A
176 181anti-parallel
Strand 4
A
146 158anti-parallel
Strand 5
A
116 127anti-parallel
Strand 6
A
212 219parallel
Strand 7
A
207 209anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
377 378first strand
Strand 2
A
496 497anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
79 82first strand
Strand 2
E
85 88anti-parallel
Strand 3
E
176 181anti-parallel
Strand 4
E
146 158anti-parallel
Strand 5
E
161 165anti-parallel
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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
79 82first strand
Strand 2
E
85 88anti-parallel
Strand 3
E
176 181anti-parallel
Strand 4
E
146 158anti-parallel
Strand 5
E
116 127anti-parallel
Strand 6
E
212 219parallel
Strand 7
E
207 209anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
328 329first strand
Strand 2
E
333 334anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
377 378first strand
Strand 2
E
496 497anti-parallel
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